Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.88694	AW124694	expressed sequence AW124694	11		104598
Mm.88694	Kif3a	kinesin family member 3A	11	11 29.5 cM	16568
Gene Ontology	ATP binding | kinesin complex | microtubule associated complex | microtubule motor activity | microtubule-based process | motor activity
Human Homolog	KIF3A[kinesin family member 3A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 129 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC GAAAAAAAAA (204) 45.7 0.0457 P8 Cb GC CCTAAAAAAA (9) 3.3 0.0033 P8 Cb GC ACCTTCAAAA (2) 1.6 0.0016 P8 Cb GC AGGAGAGGGT (7) 1.6 0.0016 P8 Cb GC CCTAATGTCT (2) 1.6 0.0016 P8 Cb GC GCGCACTGTG (3) 1.6 0.0016 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 P8 Cb GC TTATCATACC (2) 1.6 0.0016 Cb medulloblastoma GAAAAAAAAA (204) 173.4 0.1734 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma CCTAAAAAAA (9) 4.6 0.0046 Cb medulloblastoma AAAAGAAAAT (6) 2.3 0.0023 Cb medulloblastoma AGGAGAGGGT (7) 2.3 0.0023 Cb medulloblastoma CCTAATGTCT (2) 2.3 0.0023 P8 GC+1d culture GAAAAAAAAA (204) 41.1 0.0411 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture CCTAATGTCT (2) 2.3 0.0023 P8 GC+1d culture AAAAGAAAAT (6) 1.1 0.0011 P8 GC+1d culture CCTAAAAAAA (9) 1.1 0.0011 P8 GC+1d culture GAGAGAGACT (4) 1.1 0.0011 P8 GC+1d culture GCGCACTGTG (3) 1.1 0.0011 P8 GC+1d culture GGCAGCCAGA (8) 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+1d culture GGGAGGCATT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAAAAAAAAA (204) 77.3 0.0773 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture GAGAGAGACT (4) 10.5 0.0105 P8 GC+SHH+1d culture CCTAATGTCT (2) 4.7 0.0047 P8 GC+SHH+1d culture AGGAGAGGGT (7) 2.3 0.0023 P8 GC+SHH+1d culture GCGCACTGTG (3) 2.3 0.0023 P8 GC+SHH+1d culture GGCAGCCAGA (8) 2.3 0.0023 P8 GC+SHH+1d culture AAAAGAAAAT (6) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 3T3 fibroblasts ATGTGTGCAA (3) 3.5 0.0035 E15 cortex GAAAAAAAAA (204) 54.4 0.0544 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GGCAGCCAGA (8) 9.9 0.0099 P1 cortex GAAAAAAAAA (204) 45.5 0.0455 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex CCTAATGTCT (2) 9.1 0.0091 P1 cortex ATGTGTGCAA (3) 4.5 0.0045 P1 cortex GCGCACTGTG (3) 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 Hypothalamus GAAAAAAAAA (204) 67 0.067 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus GGGAGGCATT (2) 3.6 0.0036 Hypothalamus CCTAATGTCT (2) 1.8 0.0018 Hypothalamus GCGCACTGTG (3) 1.8 0.0018 Hypothalamus TTATCATACC (2) 1.8 0.0018 E12.5 retina GAAAAAAAAA (204) 46.9 0.0469 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E14.5 retina GAAAAAAAAA (204) 34.6 0.0346 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina CCTAATGTCT (2) 3.6 0.0036 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E14.5 retina GGGAGGCATT (2) 1.8 0.0018 E16.5 retina GAAAAAAAAA (204) 23.5 0.0235 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina ATGTGTGCAA (3) 3.6 0.0036 E16.5 retina GCGCACTGTG (3) 3.6 0.0036 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina TTATCATACC (2) 3.6 0.0036 E16.5 retina AGGAGAGGGT (7) 1.8 0.0018 E16.5 retina CCTAAAAAAA (9) 1.8 0.0018 E16.5 retina CCTAATGTCT (2) 1.8 0.0018 E18.5 retina GAAAAAAAAA (204) 65.5 0.0655 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CCTAATGTCT (2) 5.5 0.0055 E18.5 retina CCTAAAAAAA (9) 3.6 0.0036 E18.5 retina TTATCATACC (2) 3.6 0.0036 E18.5 retina AAAAGAAAAT (6) 1.8 0.0018 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina GAAAAAAAAA (204) 35.3 0.0353 P0.5 retina CCTAAAAAAA (9) 5.9 0.0059 P0.5 retina AGGAGAGGGT (7) 3.9 0.0039 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina CCTAATGTCT (2) 2 0.002 P0.5 retina GGCAGCCAGA (8) 2 0.002 P0.5 retina TTATCATACC (2) 2 0.002 P2.5 retina GAAAAAAAAA (204) 86.2 0.0862 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina ACCTTCAAAA (2) 1.8 0.0018 P2.5 retina GCGCACTGTG (3) 1.8 0.0018 P2.5 retina TTATCATACC (2) 1.8 0.0018 P4.5 retina GAAAAAAAAA (204) 51.5 0.0515 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina AGGAGAGGGT (7) 2 0.002 P4.5 retina CCTAAAAAAA (9) 2 0.002 P4.5 retina CCTAATGTCT (2) 2 0.002 P4.5 retina GCGCACTGTG (3) 2 0.002 P6.5 retina GAAAAAAAAA (204) 40 0.04 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina CCTAATGTCT (2) 5 0.005 P6.5 retina GGGAGGCATT (2) 3.3 0.0033 P6.5 retina AAAAGAAAAT (6) 1.7 0.0017 P6.5 retina CCTAAAAAAA (9) 1.7 0.0017 P10.5 crx- retina GAAAAAAAAA (204) 16.7 0.0167 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina GGGAGGCATT (2) 3.7 0.0037 P10.5 crx- retina TTATCATACC (2) 3.7 0.0037 P10.5 crx- retina CCTAAAAAAA (9) 1.9 0.0019 P10.5 crx- retina GCGCACTGTG (3) 1.9 0.0019 P10.5 crx+ retina GAAAAAAAAA (204) 42.3 0.0423 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina CCTAAAAAAA (9) 3.8 0.0038 P10.5 crx+ retina CCTAATGTCT (2) 3.8 0.0038 P10.5 crx+ retina ACCTTCAAAA (2) 1.9 0.0019 P10.5 crx+ retina AGGAGAGGGT (7) 1.9 0.0019 P10.5 crx+ retina TTATCATACC (2) 1.9 0.0019 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GAAAAAAAAA (204) 16.7 0.0167 Adult retinal CCTAAAAAAA (9) 3.7 0.0037 Adult retinal GCGCACTGTG (3) 1.9 0.0019 Adult retinal GGGAGGCATT (2) 1.9 0.0019 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL GAAAAAAAAA (204) 24.9 0.0249 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AAAAGAAAAT (6) 1.9 0.0019 ONL GGCAGCCAGA (8) 1.9 0.0019