Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.8903	Bckdk	branched chain ketoacid dehydrogenase kinase	7		12041
Gene Ontology	ATP binding | kinase activity | mitochondrion | protein kinase activity | signal transduction | transferase activity | two-component sensor molecule activity
Human Homolog	BCKDK[branched chain alpha-ketoacid dehydrogenase kinase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGCTCTATT (5) 3.3 0.0033 P8 Cb GC GCTGTGGCTT (2) 3.3 0.0033 P8 Cb GC TCCCAGAGTG (3) 3.3 0.0033 Cb medulloblastoma AATGGCTTTG (7) 2.3 0.0023 Cb medulloblastoma GCTGTGGCTT (2) 2.3 0.0023 Cb medulloblastoma GCTTTGGCTT (7) 2.3 0.0023 P8 GC+1d culture GCTGTGGCTT (2) 5.7 0.0057 P8 GC+1d culture ATGCTCTATT (5) 2.3 0.0023 P8 GC+1d culture TGTGTCTGTG (16) 2.3 0.0023 P8 GC+1d culture AATGGCTTTG (7) 1.1 0.0011 P8 GC+1d culture TCCCAGAGTG (3) 1.1 0.0011 P8 GC+SHH+1d culture GCTTTGGCTT (7) 2.3 0.0023 P8 GC+SHH+1d culture ATGCTCTATT (5) 1.2 0.0012 P8 GC+SHH+1d culture GCTGTGGCTT (2) 1.2 0.0012 3T3 fibroblasts GCTTTGGCTT (7) 7 0.007 3T3 fibroblasts TGTGTCTGTG (16) 7 0.007 3T3 fibroblasts ATGCTCTATT (5) 3.5 0.0035 E15 cortex GCTTTGGCTT (7) 9.9 0.0099 E15 cortex GCTGTGGCTT (2) 4.9 0.0049 P1 cortex CCGCTTGGAC 22.7 0.0227 Hypothalamus AATGGCTTTG (7) 1.8 0.0018 Hypothalamus TGTGTCTGTG (16) 1.8 0.0018 E12.5 retina GCTGTGGCTT (2) 5.6 0.0056 E12.5 retina TGTGTCTGTG (16) 1.9 0.0019 E16.5 retina ATGCTCTATT (5) 1.8 0.0018 E16.5 retina GCTTTGGCTT (7) 1.8 0.0018 E18.5 retina ATGCTCTATT (5) 1.8 0.0018 E18.5 retina GCTGTGGCTT (2) 1.8 0.0018 E18.5 retina TGTGTCTGTG (16) 1.8 0.0018 P0.5 retina ATGCTCTATT (5) 3.9 0.0039 P0.5 retina GCTGTGGCTT (2) 3.9 0.0039 P0.5 retina GCTTTGGCTT (7) 2 0.002 P2.5 retina TGTGTCTGTG (16) 5.3 0.0053 P2.5 retina ATGCTCTATT (5) 3.5 0.0035 P2.5 retina GGGGTTTTTT (2) 3.5 0.0035 P4.5 retina ATGCTCTATT (5) 2 0.002 P4.5 retina TGTGTCTGTG (16) 2 0.002 P6.5 retina TGTGTCTGTG (16) 3.3 0.0033 P6.5 retina GCTGTGGCTT (2) 1.7 0.0017 P6.5 retina GCTTTGGCTT (7) 1.7 0.0017 P10.5 crx- retina GCTTTGGCTT (7) 3.7 0.0037 P10.5 crx- retina TGTGTCTGTG (16) 1.9 0.0019 P10.5 crx+ retina TGTGTCTGTG (16) 30.8 0.0308 P10.5 crx+ retina ATGCTCTATT (5) 1.9 0.0019 Adult retinal TGTGTCTGTG (16) 31.5 0.0315 Adult retinal GGGGTTTTTT (2) 1.9 0.0019 ONL TGTGTCTGTG (16) 11.5 0.0115