Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]
Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24

 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.89515 Snx9sorting nexin 9 17    66616 
 Gene Ontology intracellular signaling cascade | protein transport | transport
 Human Homolog SNX9[sorting nexin 9]
 Clusters 
   Neighbors    

No In Situ Hybridization images could be found.



SAGE Tags

Total 109 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCCCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TTTTTTTTTT (2)
310.031
Cb medulloblastomaCCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TAGGGAAAAA (5)
TCTTACGCTC (2)
TTTTTTTTTT (2)
32.20.0322
P8 GC+1d cultureCACACGCACA (2)
CCTTGCAAAA
GCCACCAAGG (3)
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TTTTTTTTTT (2)
41.10.0411
P8 GC+SHH+1d cultureCCTTGCAAAA
GCCACCAAGG (3)
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TCTTACGCTC (2)
TTTTTTTTTT (2)
38.70.0387
3T3 fibroblastsGTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TCTTACGCTC (2)
17.50.0175
E15 cortexGTTGGAGCAG (2)
TTTTTTTTTT (2)
19.70.0197
P1 cortexGTCTGCTTGT (3)
TAGAAACCAA
TTTTTTTTTT (2)
13.50.0135
HypothalamusCACACGCACA (2)
CCTTGCAAAA
GCCACCAAGG (3)
GTCTGCTTGT (3)
TAGAAACCAA
TTCTTTACAA
TTTTTTTTTT (2)
19.80.0198
E12.5 retinaGTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TAGGGAAAAA (5)
TTTTTTTTTT (2)
320.032
E14.5 retinaGCCACCAAGG (3)
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TAGGGAAAAA (5)
TTTTTTTTTT (2)
52.80.0528
E16.5 retinaATTACGCCAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TAGGGAAAAA (5)
TATAAATATT
TTTTTTTTTT (2)
21.60.0216
E18.5 retinaCCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TTCTTTACAA
TTTTTTTTTT (2)
47.30.0473
P0.5 retinaATTACGCCAA
CACACGCACA (2)
CCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TTTTTTTTTT (2)
35.40.0354
P2.5 retinaCCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TTTTTTTTTT (2)
42.20.0422
P4.5 retinaCCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGAAACCAA
TATAAATATT
TTTTTTTTTT (2)
49.60.0496
P6.5 retinaCCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TAGGGAAAAA (5)
TTTTTTTTTT (2)
500.05
P10.5 crx- retinaGTCTGCTTGT (3)
GTTGGAGCAG (2)
TATAAATATT
TTCTTTACAA
18.70.0187
P10.5 crx+ retinaCACACGCACA (2)
CCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TTTTTTTTTT (2)
46.10.0461
Adult retinalATTACGCCAA
CACACGCACA (2)
CCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TTCTTTACAA
TTTTTTTTTT (2)
35.30.0353
ONLCACACGCACA (2)
CCTTGCAAAA
GTCTGCTTGT (3)
GTTGGAGCAG (2)
TTTTTTTTTT (2)
17.10.0171