Mouse Retina SAGE Library
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Gene: 
Accession: 
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag: 
Cytoband (Mm): 
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene: 
Cytoband (Hs): 
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.8983
Tnfsf13
tumor necrosis factor (ligand) superfamily, member 13
11
11 B4
69583
Mm.8983
2010012P19Rik
RIKEN cDNA 2010012P19 gene
11
72337
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 23 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 39 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCAGAACCTC (
5
)
3.3
0.0033
P8 Cb GC
TGTTTGTAAA
(
3
)
1.6
0.0016
Cb medulloblastoma
TGTTTGTAAA
(
3
)
11.6
0.0116
P8 GC+1d culture
TGTTTGTAAA
(
3
)
24
0.024
P8 GC+1d culture
ATGTGACTTT
(
7
)
1.1
0.0011
P8 GC+1d culture
GATATTAAAA
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGTTTGTAAA
(
3
)
12.9
0.0129
P8 GC+SHH+1d culture
ATGTGACTTT
(
7
)
2.3
0.0023
P8 GC+SHH+1d culture
ATTTCTCTTC
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
GCAGAACCTC (
5
)
1.2
0.0012
3T3 fibroblasts
GCAGAACCTC (
5
)
7
0.007
E15 cortex
GCAGAACCTC (
5
)
9.9
0.0099
E15 cortex
TGTTTGTAAA
(
3
)
4.9
0.0049
P1 cortex
TGTTTGTAAA
(
3
)
31.8
0.0318
Hypothalamus
TGTTTGTAAA
(
3
)
5.4
0.0054
Hypothalamus
ATTTCTCTTC
(
4
)
1.8
0.0018
E12.5 retina
TGTTTGTAAA
(
3
)
11.3
0.0113
E12.5 retina
GCAGAACCTC (
5
)
1.9
0.0019
E14.5 retina
TGTTTGTAAA
(
3
)
16.4
0.0164
E16.5 retina
TGTTTGTAAA
(
3
)
23.5
0.0235
E16.5 retina
ATTTCTCTTC
(
4
)
1.8
0.0018
E18.5 retina
TGTTTGTAAA
(
3
)
16.4
0.0164
P0.5 retina
TGTTTGTAAA
(
3
)
7.9
0.0079
P0.5 retina
ATGTGACTTT
(
7
)
2
0.002
P2.5 retina
TGTTTGTAAA
(
3
)
5.3
0.0053
P4.5 retina
TGTTTGTAAA
(
3
)
35.7
0.0357
P6.5 retina
TGTTTGTAAA
(
3
)
25
0.025
P6.5 retina
ATTTCTCTTC
(
4
)
1.7
0.0017
P6.5 retina
GATATTAAAA
(
4
)
1.7
0.0017
P10.5 crx- retina
TGTTTGTAAA
(
3
)
5.6
0.0056
P10.5 crx- retina
ATTTCTCTTC
(
4
)
1.9
0.0019
P10.5 crx- retina
GCAGAACCTC (
5
)
1.9
0.0019
P10.5 crx+ retina
TGTTTGTAAA
(
3
)
7.7
0.0077
P10.5 crx+ retina
GATATTAAAA
(
4
)
1.9
0.0019
Adult retinal
GATATTAAAA
(
4
)
5.6
0.0056
Adult retinal
ATTTCTCTTC
(
4
)
1.9
0.0019
ONL
GATATTAAAA
(
4
)
15.3
0.0153
ONL
ATTTCTCTTC
(
4
)
5.7
0.0057
ONL
TGTTTGTAAA
(
3
)
1.9
0.0019