Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.90787	Ngfrap1	nerve growth factor receptor (TNFRSF16) associated protein 1	X	X 57.5 cM	12070
Gene Ontology	cytosol | death receptor binding | induction of apoptosis | induction of apoptosis via death domain receptors | receptor activity
Human Homolog	NGFRAP1[nerve growth factor receptor (TNFRSF16) associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 67 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTGTGCCC (2) GAAAGCAATG TGCCAGGGTG 34.2 0.0342 Cb medulloblastoma GAAAGCAATG GAGGAGATGA (2) GGAAAGGCAA TGCCAGGTGG 30 0.03 P8 GC+1d culture GAAAGCAATG GAGGAGATGA (2) GCCAATGTCC (2) GGAAAGGCAA TGCCAGGGTG 55.9 0.0559 P8 GC+SHH+1d culture GAAAGCAATG GGAAAGGCAA GGTTGTCTCT TGCCAGGGTG 50.3 0.0503 3T3 fibroblasts GGTTGTCTCT GTGCAGGTGG 7 0.007 E15 cortex GAAAGCAATG GTGCAGGTGG 19.7 0.0197 P1 cortex GAAACCAATG GAAAGCAATG GGTTGTCTCT 13.5 0.0135 Hypothalamus ATGAATTCTG (2) GAAAGCAATG GGAAAGGCAA GTGATCGTGG TGCCAGGGTG TGCCAGGTGG 67 0.067 E12.5 retina GAAAGCAATG GGAAAGGCAA 67.6 0.0676 E14.5 retina ATGAATTCTG (2) GAAAGCAATG GGTTGTCTCT TGCCAGGTGG 67.3 0.0673 E16.5 retina ATGAATTCTG (2) CCCTGTGCCC (2) GAAAGCAATG GCCAATGTCC (2) TGCCAGGGTG TGCCAGGTGG 88.7 0.0887 E18.5 retina ATGAATTCTG (2) GAAAGCAATG GGTTGTCTCT 69.1 0.0691 P0.5 retina GAAAGCAATG TGCCAGGGTG 23.6 0.0236 P2.5 retina GAAAGCAATG GGTTGTCTCT 51.1 0.0511 P4.5 retina GAAACCAATG GAAAGCAATG GTGATCGTGG 37.7 0.0377 P6.5 retina GAAAGCAATG GCCAATGTCC (2) 50.1 0.0501 P10.5 crx- retina CCCTGTGCCC (2) GAAAGCAATG GGTTGTCTCT TGCCAGGGTG TGCCAGGTGG 41 0.041 P10.5 crx+ retina GAAACCAATG GAAAGCAATG TGCCAGGGTG 48 0.048 Adult retinal GAAAGCAATG GAGGAGATGA (2) GGTTGTCTCT GTGCAGGTGG 15 0.015 ONL GAAAGCAATG GGTTGTCTCT 7.6 0.0076