Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.925	Tfdp1	transcription factor Dp 1	8	8 A1-A3	21781
Gene Ontology	apoptosis | cell cycle | DNA binding | nucleus | regulation of cell cycle | regulation of transcription | regulation of transcription, DNA-dependent | transcription factor activity | transcription factor complex
Human Homolog	TFDP1[transcription factor Dp-1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 13 In Situ Hybridization Images

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SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCATTTTAA (2) 19.6 0.0196 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC AACATCATCT (7) 6.5 0.0065 P8 Cb GC AGCATCTTCC 1.6 0.0016 P8 Cb GC GCTGCACCAG (3) 1.6 0.0016 P8 Cb GC TGGGCTGGAG (5) 1.6 0.0016 P8 Cb GC TGGTTTCTGG (10) 1.6 0.0016 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma ATAAGACATA (2) 4.6 0.0046 Cb medulloblastoma GGCATTTTAA (2) 4.6 0.0046 Cb medulloblastoma AAACAAATAA 2.3 0.0023 Cb medulloblastoma AGCATCTTCC 2.3 0.0023 Cb medulloblastoma TGGGCTGGAG (5) 2.3 0.0023 P8 GC+1d culture AACATCATCT (7) 6.8 0.0068 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture GCTGCACCAG (3) 2.3 0.0023 P8 GC+1d culture GGCATTTTAA (2) 2.3 0.0023 P8 GC+1d culture TGGTTTCTGG (10) 2.3 0.0023 P8 GC+1d culture AGCATCTTCC 1.1 0.0011 P8 GC+SHH+1d culture AACATCATCT (7) 7 0.007 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture GGCATTTTAA (2) 7 0.007 P8 GC+SHH+1d culture AGCATCTTCC 4.7 0.0047 P8 GC+SHH+1d culture TGGTTTCTGG (10) 3.5 0.0035 P8 GC+SHH+1d culture CAGTGTCCAA (5) 2.3 0.0023 P8 GC+SHH+1d culture AAACAAATAC 1.2 0.0012 P8 GC+SHH+1d culture GCTGCACCAG (3) 1.2 0.0012 3T3 fibroblasts TGGGCTGGAG (5) 3.5 0.0035 3T3 fibroblasts TGGTTTCTGG (10) 3.5 0.0035 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex AACATCATCT (7) 4.9 0.0049 E15 cortex AGCATCTTCC 4.9 0.0049 E15 cortex GCTGCACCAG (3) 4.9 0.0049 E15 cortex TGGGCTGGAG (5) 4.9 0.0049 P1 cortex AACATCATCT (7) 9.1 0.0091 P1 cortex GGCATTTTAA (2) 9.1 0.0091 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex TGGTTTCTGG (10) 4.5 0.0045 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus AACATCATCT (7) 5.4 0.0054 Hypothalamus AAACAAATAC 1.8 0.0018 Hypothalamus CAGTGTCCAA (5) 1.8 0.0018 Hypothalamus GGCATTTTAA (2) 1.8 0.0018 Hypothalamus TGGTTTCTGG (10) 1.8 0.0018 E12.5 retina AGCATCTTCC 5.6 0.0056 E12.5 retina CAGTGTCCAA (5) 3.8 0.0038 E12.5 retina GCTGCACCAG (3) 3.8 0.0038 E12.5 retina GGCATTTTAA (2) 3.8 0.0038 E12.5 retina TGGTTTCTGG (10) 3.8 0.0038 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina TGGTTTCTGG (10) 9.1 0.0091 E14.5 retina GGCATTTTAA (2) 7.3 0.0073 E14.5 retina AACATCATCT (7) 5.5 0.0055 E14.5 retina AGCATCTTCC 5.5 0.0055 E14.5 retina AAACAAATAC 1.8 0.0018 E14.5 retina CAGTGTCCAA (5) 1.8 0.0018 E14.5 retina GCTGCACCAG (3) 1.8 0.0018 E16.5 retina TGGTTTCTGG (10) 18.1 0.0181 E16.5 retina GGCATTTTAA (2) 10.9 0.0109 E16.5 retina AACATCATCT (7) 9.1 0.0091 E16.5 retina GCTGCACCAG (3) 3.6 0.0036 E16.5 retina AAACAAATAC 1.8 0.0018 E16.5 retina AGCATCTTCC 1.8 0.0018 E16.5 retina ATAAGACATA (2) 1.8 0.0018 E16.5 retina CAGTGTCCAA (5) 1.8 0.0018 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E18.5 retina GGCATTTTAA (2) 38.2 0.0382 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina AAACAAATAA 1.8 0.0018 E18.5 retina CAGTGTCCAA (5) 1.8 0.0018 E18.5 retina GCTGCACCAG (3) 1.8 0.0018 E18.5 retina TGGTTTCTGG (10) 1.8 0.0018 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina GGCATTTTAA (2) 3.9 0.0039 P0.5 retina TGGTTTCTGG (10) 3.9 0.0039 P0.5 retina AAACAAATAC 2 0.002 P0.5 retina AACATCATCT (7) 2 0.002 P0.5 retina AGCATCTTCC 2 0.002 P0.5 retina GCTGCACCAG (3) 2 0.002 P2.5 retina GGCATTTTAA (2) 8.8 0.0088 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina TGGTTTCTGG (10) 7 0.007 P2.5 retina AGCATCTTCC 3.5 0.0035 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina GGCATTTTAA (2) 9.9 0.0099 P4.5 retina AGCATCTTCC 5.9 0.0059 P4.5 retina AACATCATCT (7) 2 0.002 P4.5 retina GCTGCACCAG (3) 2 0.002 P4.5 retina TGGTTTCTGG (10) 2 0.002 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina GGCATTTTAA (2) 10 0.01 P6.5 retina GCTGCACCAG (3) 8.3 0.0083 P6.5 retina AACATCATCT (7) 5 0.005 P6.5 retina AGCATCTTCC 1.7 0.0017 P10.5 crx- retina AGCATCTTCC 7.4 0.0074 P10.5 crx- retina AACATCATCT (7) 3.7 0.0037 P10.5 crx- retina GCTGCACCAG (3) 3.7 0.0037 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx- retina GGCATTTTAA (2) 3.7 0.0037 P10.5 crx- retina TGGTTTCTGG (10) 3.7 0.0037 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina GCTGCACCAG (3) 3.8 0.0038 P10.5 crx+ retina GGCATTTTAA (2) 3.8 0.0038 P10.5 crx+ retina AAACAAATAA 1.9 0.0019 P10.5 crx+ retina AGCATCTTCC 1.9 0.0019 P10.5 crx+ retina TGGTTTCTGG (10) 1.9 0.0019 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 Adult retinal GGCATTTTAA (2) 3.7 0.0037 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL TGGTTTCTGG (10) 7.7 0.0077 ONL AAACAAATAA 3.8 0.0038 ONL GGCATTTTAA (2) 1.9 0.0019