Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.93193	4432405B04Rik	RIKEN cDNA 4432405B04 gene	5		67978
Gene Ontology	extracellular space
Human Homolog	FLJ12975[hypothetical protein FLJ12975]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 101 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CCTTTATTCC (18) 3.3 0.0033 P8 Cb GC CAGGGAAACC (2) 1.6 0.0016 P8 Cb GC CCTGGACTCT 1.6 0.0016 P8 Cb GC CTGGCCATCC (6) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CCTGGACTCT 6.9 0.0069 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CAGGGAAACC (2) 11.4 0.0114 P8 GC+1d culture CCTTTATTCC (18) 6.8 0.0068 P8 GC+1d culture GCCCAGGCTG (3) 1.1 0.0011 P8 GC+1d culture GGGTTTTATG 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CAGGGAAACC (2) 11.7 0.0117 P8 GC+SHH+1d culture CCTGGACTCT 1.2 0.0012 P8 GC+SHH+1d culture CCTTTATTCC (18) 1.2 0.0012 P8 GC+SHH+1d culture GCCCAGGCTG (3) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts CAGGGAAACC (2) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CAGGGAAACC (2) 4.9 0.0049 E15 cortex GCCCAGGCTG (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex CCTTTATTCC (18) 27.3 0.0273 P1 cortex CAGGGAAACC (2) 9.1 0.0091 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CAGGGAAACC (2) 3.6 0.0036 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CAGGGAAACC (2) 13.1 0.0131 E12.5 retina CCTTTATTCC (18) 5.6 0.0056 E12.5 retina CCTGGACTCT 3.8 0.0038 E12.5 retina GCCCAGGCTG (3) 1.9 0.0019 E12.5 retina GGGTTTTATG 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina CCTTTATTCC (18) 12.8 0.0128 E14.5 retina CAGGGAAACC (2) 5.5 0.0055 E14.5 retina CCTGGACTCT 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CAGGGAAACC (2) 18.1 0.0181 E16.5 retina CCTGGACTCT 3.6 0.0036 E16.5 retina CCTTTATTCC (18) 3.6 0.0036 E16.5 retina CTGGCCATCC (6) 3.6 0.0036 E16.5 retina GCCCAGGCTG (3) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CCTTTATTCC (18) 7.3 0.0073 E18.5 retina CAGGGAAACC (2) 5.5 0.0055 E18.5 retina CCTGGACTCT 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CAGGGAAACC (2) 9.8 0.0098 P0.5 retina CCTTTATTCC (18) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CAGGGAAACC (2) 5.3 0.0053 P2.5 retina CCTTTATTCC (18) 3.5 0.0035 P2.5 retina GGGTTTTATG 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CCTTTATTCC (18) 7.9 0.0079 P4.5 retina CAGGGAAACC (2) 5.9 0.0059 P4.5 retina CCTGGACTCT 4 0.004 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CAGGGAAACC (2) 8.3 0.0083 P6.5 retina CCTTTATTCC (18) 5 0.005 P6.5 retina CCTGGACTCT 1.7 0.0017 P6.5 retina GCCCAGGCTG (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CAGGGAAACC (2) 9.3 0.0093 P10.5 crx- retina CCTTTATTCC (18) 3.7 0.0037 P10.5 crx- retina CCTGGACTCT 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CAGGGAAACC (2) 7.7 0.0077 P10.5 crx+ retina CCTTTATTCC (18) 7.7 0.0077 P10.5 crx+ retina CCTGGACTCT 3.8 0.0038 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CAGGGAAACC (2) 18.5 0.0185 Adult retinal CCTGGACTCT 3.7 0.0037 Adult retinal CCTTTATTCC (18) 1.9 0.0019 Adult retinal CTGGCCATCC (6) 1.9 0.0019 Adult retinal GGGTTTTATG 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CAGGGAAACC (2) 9.6 0.0096 ONL CCTTTATTCC (18) 1.9 0.0019 ONL GCCCAGGCTG (3) 1.9 0.0019