Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.94560	Cxxc5	CXXC finger 5	18		67393
Gene Ontology	DNA binding | zinc ion binding
Human Homolog	CXXC5[CXXC finger 5]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTGTCAA 3.3 0.0033 P8 Cb GC ATAACAAAAA 1.6 0.0016 P8 Cb GC TGTGCGCCCT (3) 1.6 0.0016 Cb medulloblastoma TGTGCGCCCT (3) 6.9 0.0069 Cb medulloblastoma ATAACAAAAA 2.3 0.0023 P8 GC+1d culture TTTGTGTCAA 4.6 0.0046 P8 GC+1d culture ATAACAAAAA 3.4 0.0034 P8 GC+1d culture CCCGTCCCTC (3) 2.3 0.0023 P8 GC+1d culture TGTGCAGAGG 2.3 0.0023 P8 GC+1d culture TGTGCGCCCT (3) 1.1 0.0011 P8 GC+1d culture TTTGTGTCAT 1.1 0.0011 P8 GC+SHH+1d culture TTTGTGTCAA 4.7 0.0047 P8 GC+SHH+1d culture TGTGCGCCCT (3) 3.5 0.0035 P8 GC+SHH+1d culture TGTTGTTGAA 2.3 0.0023 P8 GC+SHH+1d culture TTTGTGTCAT 2.3 0.0023 P8 GC+SHH+1d culture ATAACAAAAA 1.2 0.0012 P8 GC+SHH+1d culture GCTCCTCCTT 1.2 0.0012 3T3 fibroblasts TGTGCGCCCT (3) 7 0.007 3T3 fibroblasts ATGGGGGTGG (2) 3.5 0.0035 E15 cortex TGTGCGCCCT (3) 9.9 0.0099 Hypothalamus ATAACAAAAA 1.8 0.0018 Hypothalamus ATGGGGGTGG (2) 1.8 0.0018 Hypothalamus TGTGCGCCCT (3) 1.8 0.0018 E12.5 retina ATAACAAAAA 3.8 0.0038 E12.5 retina TTTGTGTCAT 1.9 0.0019 E14.5 retina TGTGCGCCCT (3) 7.3 0.0073 E14.5 retina TTTGTGTCAA 7.3 0.0073 E14.5 retina CCGCAGCGTT 5.5 0.0055 E14.5 retina ATAACAAAAA 3.6 0.0036 E14.5 retina CCCGTCCCTC (3) 1.8 0.0018 E14.5 retina GCTCCTCCTT 1.8 0.0018 E14.5 retina TGTGCAGAGG 1.8 0.0018 E16.5 retina TGTGCGCCCT (3) 12.7 0.0127 E16.5 retina ATAACAAAAA 1.8 0.0018 E16.5 retina GCTCCTCCTT 1.8 0.0018 E16.5 retina TTTGTGTCAA 1.8 0.0018 E18.5 retina TTTGTGTCAA 12.7 0.0127 E18.5 retina ATAACAAAAA 5.5 0.0055 E18.5 retina CCCGTCCCTC (3) 1.8 0.0018 E18.5 retina TGTGCGCCCT (3) 1.8 0.0018 E18.5 retina TGTTGTTGAA 1.8 0.0018 P0.5 retina TGTGCGCCCT (3) 5.9 0.0059 P0.5 retina ATAACAAAAA 3.9 0.0039 P0.5 retina CTGTTTGTAT 2 0.002 P2.5 retina TGTGCGCCCT (3) 8.8 0.0088 P2.5 retina TTTGTGTCAA 5.3 0.0053 P2.5 retina ATAACAAAAA 3.5 0.0035 P4.5 retina ATAACAAAAA 5.9 0.0059 P4.5 retina TTTGTGTCAA 5.9 0.0059 P4.5 retina TGTGCGCCCT (3) 2 0.002 P6.5 retina TGTGCGCCCT (3) 3.3 0.0033 P6.5 retina TTTGTGTCAA 3.3 0.0033 P6.5 retina ATAACAAAAA 1.7 0.0017 P10.5 crx- retina TGTGCGCCCT (3) 7.4 0.0074 P10.5 crx- retina CTGTTTGTAT 1.9 0.0019 P10.5 crx- retina TTTGTGTCAA 1.9 0.0019 P10.5 crx+ retina TGTGCAGAGG 1.9 0.0019 P10.5 crx+ retina TGTGCGCCCT (3) 1.9 0.0019 Adult retinal ATGGGGGTGG (2) 1.9 0.0019 ONL CTGTTTGTAT 1.9 0.0019