Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.957	Cops4	COP9 (constitutive photomorphogenic) homolog, subunit 4 (Arabidopsis thaliana)	5	5 54.0 cM	26891
Gene Ontology	protein binding | signalosome complex
Human Homolog	COPS4[COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 39 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTACTCT (4) 17.9 0.0179 P8 Cb GC AAAGCTTTTG (5) 4.9 0.0049 Cb medulloblastoma TGGTTACTCT (4) 20.8 0.0208 Cb medulloblastoma AAAGCTTTTG (5) 6.9 0.0069 Cb medulloblastoma CACTGCCACT 4.6 0.0046 P8 GC+1d culture TGGTTACTCT (4) 20.5 0.0205 P8 GC+1d culture AAAGCTTTTG (5) 3.4 0.0034 P8 GC+1d culture CACTGCCACT 1.1 0.0011 P8 GC+SHH+1d culture TGGTTACTCT (4) 18.7 0.0187 P8 GC+SHH+1d culture AAAGCTTTTG (5) 1.2 0.0012 3T3 fibroblasts TGGTTACTCT (4) 3.5 0.0035 E15 cortex AAAGCTTTTG (5) 4.9 0.0049 E15 cortex TGGTTACTCT (4) 4.9 0.0049 P1 cortex TGGTTACTCT (4) 4.5 0.0045 Hypothalamus TGGTTACTCT (4) 16.3 0.0163 Hypothalamus CACTGCCACT 1.8 0.0018 E12.5 retina TGGTTACTCT (4) 16.9 0.0169 E12.5 retina AAAGCTTTTG (5) 1.9 0.0019 E12.5 retina CACTGCCACT 1.9 0.0019 E14.5 retina TGGTTACTCT (4) 16.4 0.0164 E14.5 retina CACTGCCACT 1.8 0.0018 E16.5 retina TGGTTACTCT (4) 10.9 0.0109 E18.5 retina TGGTTACTCT (4) 29.1 0.0291 E18.5 retina AAAGCTTTTG (5) 1.8 0.0018 P0.5 retina TGGTTACTCT (4) 13.7 0.0137 P0.5 retina AAAGCTTTTG (5) 2 0.002 P2.5 retina TGGTTACTCT (4) 19.4 0.0194 P4.5 retina TGGTTACTCT (4) 35.7 0.0357 P4.5 retina AAAGCTTTTG (5) 2 0.002 P4.5 retina CACTGCCACT 2 0.002 P6.5 retina TGGTTACTCT (4) 11.7 0.0117 P10.5 crx- retina TGGTTACTCT (4) 9.3 0.0093 P10.5 crx- retina CACTGCCACT 1.9 0.0019 P10.5 crx+ retina TGGTTACTCT (4) 19.2 0.0192 P10.5 crx+ retina AAAGCTTTTG (5) 1.9 0.0019 P10.5 crx+ retina CACTGCCACT 1.9 0.0019 Adult retinal TGGTTACTCT (4) 5.6 0.0056 Adult retinal AAAGCTTTTG (5) 3.7 0.0037 ONL TGGTTACTCT (4) 5.7 0.0057