Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9684	Vasp	vasodilator-stimulated phosphoprotein	7		22323
Gene Ontology	actin binding | filopodium | focal adhesion | lamellipodium
Human Homolog	VASP[vasodilator-stimulated phosphoprotein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 71 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CATATACTCC (3) 11.4 0.0114 P8 Cb GC GAGCAGGGGA (3) 8.2 0.0082 P8 Cb GC GGGGGGAGGG (17) 1.6 0.0016 Cb medulloblastoma GAGCAGGGGA (3) 18.5 0.0185 Cb medulloblastoma GTCACACCCA (3) 2.3 0.0023 P8 GC+1d culture GAGCAGGGGA (3) 8 0.008 P8 GC+1d culture GTCACACCCA (3) 5.7 0.0057 P8 GC+1d culture CATATACTCC (3) 4.6 0.0046 P8 GC+1d culture CTGGGACCGG (3) 4.6 0.0046 P8 GC+1d culture GCAACGCCTT 1.1 0.0011 P8 GC+1d culture GCCACGCCCT (2) 1.1 0.0011 P8 GC+SHH+1d culture GAGCAGGGGA (3) 9.4 0.0094 P8 GC+SHH+1d culture CATATACTCC (3) 8.2 0.0082 P8 GC+SHH+1d culture GTCACACCCA (3) 4.7 0.0047 P8 GC+SHH+1d culture CTGGGACCGG (3) 2.3 0.0023 P8 GC+SHH+1d culture GCCACGCCCT (2) 1.2 0.0012 3T3 fibroblasts GCCACGCCCT (2) 14 0.014 3T3 fibroblasts GTCACACCCA (3) 10.5 0.0105 3T3 fibroblasts CATATACTCC (3) 7 0.007 3T3 fibroblasts GAGCAGGGGA (3) 3.5 0.0035 E15 cortex GCCACGCCCT (2) 19.8 0.0198 E15 cortex CTGGGACCGG (3) 9.9 0.0099 E15 cortex GAGCAGGGGA (3) 9.9 0.0099 P1 cortex CTGGGACCGG (3) 9.1 0.0091 P1 cortex CATATACTCC (3) 4.5 0.0045 P1 cortex GCCACGCCCT (2) 4.5 0.0045 Hypothalamus GAGCAGGGGA (3) 5.4 0.0054 E12.5 retina CATATACTCC (3) 1.9 0.0019 E12.5 retina CTGGGACCGG (3) 1.9 0.0019 E12.5 retina GAGCAGGGGA (3) 1.9 0.0019 E12.5 retina GTCACACCCA (3) 1.9 0.0019 E14.5 retina GAGCAGGGGA (3) 14.6 0.0146 E14.5 retina GCCACGCCCT (2) 1.8 0.0018 E14.5 retina GCCGGTGGGC (3) 1.8 0.0018 E14.5 retina GGCCCTTGCT (2) 1.8 0.0018 E16.5 retina GAGCAGGGGA (3) 14.5 0.0145 E16.5 retina GGCCCTTGCT (2) 10.9 0.0109 E16.5 retina CATATACTCC (3) 1.8 0.0018 E16.5 retina CTGGGACCGG (3) 1.8 0.0018 E16.5 retina GCAACGCCTT 1.8 0.0018 E18.5 retina GAGCAGGGGA (3) 7.3 0.0073 E18.5 retina GGGGGGAGGG (17) 1.8 0.0018 E18.5 retina GTCACACCCA (3) 1.8 0.0018 P0.5 retina CTGGGACCGG (3) 9.8 0.0098 P0.5 retina GAGCAGGGGA (3) 7.9 0.0079 P0.5 retina GCCACGCCCT (2) 3.9 0.0039 P2.5 retina GAGCAGGGGA (3) 12.3 0.0123 P2.5 retina GCCACGCCCT (2) 5.3 0.0053 P2.5 retina GTCACACCCA (3) 3.5 0.0035 P2.5 retina GCCGGTGGGC (3) 1.8 0.0018 P2.5 retina GGCCCTTGCT (2) 1.8 0.0018 P2.5 retina GGGGGGAGGG (17) 1.8 0.0018 P4.5 retina GAGCAGGGGA (3) 5.9 0.0059 P4.5 retina CATATACTCC (3) 2 0.002 P4.5 retina CTGGGACCGG (3) 2 0.002 P4.5 retina GGGGGGAGGG (17) 2 0.002 P6.5 retina GAGCAGGGGA (3) 11.7 0.0117 P6.5 retina CTGGGACCGG (3) 3.3 0.0033 P6.5 retina GCCACGCCCT (2) 1.7 0.0017 P6.5 retina GCCGGTGGGC (3) 1.7 0.0017 P10.5 crx- retina GAGCAGGGGA (3) 7.4 0.0074 P10.5 crx- retina GCCACGCCCT (2) 3.7 0.0037 P10.5 crx+ retina GAGCAGGGGA (3) 28.8 0.0288 P10.5 crx+ retina GCCACGCCCT (2) 1.9 0.0019 P10.5 crx+ retina GGGGGGAGGG (17) 1.9 0.0019 P10.5 crx+ retina GTCACACCCA (3) 1.9 0.0019 Adult retinal GAGCAGGGGA (3) 1.9 0.0019 Adult retinal GCAACGCCTT 1.9 0.0019 Adult retinal GCCACGCCCT (2) 1.9 0.0019 Adult retinal GTCACACCCA (3) 1.9 0.0019 ONL GGGGGGAGGG (17) 1.9 0.0019