Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.97
Semcap2
semaF cytoplasmic domain associated protein 2
3
54120
Human Homolog
GIPC2[PDZ domain protein GIPC2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCT (
38
)
4.9
0.0049
P8 Cb GC
AAACAAGGCA (
3
)
1.6
0.0016
Cb medulloblastoma
AAACAAGGCA (
3
)
2.3
0.0023
P8 GC+1d culture
GGACAGCTCC (
11
)
2.3
0.0023
P8 GC+1d culture
AAACAGGAAG (
3
)
1.1
0.0011
P8 GC+1d culture
CCTTTAATCT (
38
)
1.1
0.0011
P8 GC+SHH+1d culture
CCTTTAATCT (
38
)
3.5
0.0035
P8 GC+SHH+1d culture
AAACAAGGCA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
GGACAGCTCC (
11
)
1.2
0.0012
P8 GC+SHH+1d culture
TTTGAAGCTG
(
4
)
1.2
0.0012
3T3 fibroblasts
CCTTTAATCT (
38
)
10.5
0.0105
P1 cortex
CCTTTAATCT (
38
)
4.5
0.0045
Hypothalamus
AAACAAGGCA (
3
)
1.8
0.0018
Hypothalamus
CCTTTAATCT (
38
)
1.8
0.0018
E12.5 retina
CCTTTAATCT (
38
)
1.9
0.0019
E14.5 retina
CCTTTAATCT (
38
)
12.8
0.0128
E16.5 retina
AAACAGGAAG (
3
)
1.8
0.0018
E16.5 retina
TTTGAAGCTG
(
4
)
1.8
0.0018
P0.5 retina
AAACAAGGCA (
3
)
3.9
0.0039
P0.5 retina
CCTTTAATCT (
38
)
2
0.002
P2.5 retina
AAACAAGGCA (
3
)
3.5
0.0035
P2.5 retina
CCTTTAATCT (
38
)
3.5
0.0035
P4.5 retina
CCTTTAATCT (
38
)
4
0.004
P6.5 retina
CCTTTAATCT (
38
)
11.7
0.0117
P10.5 crx+ retina
AAACAAGGCA (
3
)
1.9
0.0019
Adult retinal
CCTTTAATCT (
38
)
7.4
0.0074
Adult retinal
AAACAAGGCA (
3
)
1.9
0.0019
ONL
CCTTTAATCT (
38
)
11.5
0.0115
ONL
AAACAAGGCA (
3
)
1.9
0.0019
ONL
AAACAGGAAG (
3
)
1.9
0.0019
