Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9745	Ldh2	lactate dehydrogenase 2, B chain	6	6 62.0 cM	16832
Gene Ontology	glycolysis | L-lactate dehydrogenase activity | oxidoreductase activity
Human Homolog	LDHB[lactate dehydrogenase B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 215 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGATATGAGC (3) 32.6 0.0326 P8 Cb GC GACTGACGAG (2) 11.4 0.0114 P8 Cb GC TATTTAGTCC (2) 11.4 0.0114 P8 Cb GC GCCAGAAAAA (10) 3.3 0.0033 P8 Cb GC GGCAAAAAGC (3) 3.3 0.0033 P8 Cb GC GTGAAGGTGA (7) 3.3 0.0033 P8 Cb GC CTTGAAAAAA (7) 1.6 0.0016 P8 Cb GC GGCAAAAAAA (17) 1.6 0.0016 P8 Cb GC GGGAAAAAAA (36) 1.6 0.0016 P8 Cb GC GTGGTGGACA (5) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma GGGAAAAAAA (36) 92.5 0.0925 Cb medulloblastoma TGATATGAGC (3) 67.1 0.0671 Cb medulloblastoma GCCAGAAAAA (10) 13.9 0.0139 Cb medulloblastoma GGCAAAAAAA (17) 11.6 0.0116 Cb medulloblastoma TATTTAGTCC (2) 11.6 0.0116 Cb medulloblastoma CCTGAAAAAA (5) 4.6 0.0046 Cb medulloblastoma GACTGACGAG (2) 4.6 0.0046 Cb medulloblastoma TGCCATCAAA (6) 4.6 0.0046 Cb medulloblastoma GACTCGATGA 2.3 0.0023 Cb medulloblastoma GGGAGAAGAA (6) 2.3 0.0023 Cb medulloblastoma GTGGTGGACA (5) 2.3 0.0023 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TATTTAGTCC (2) 20.5 0.0205 P8 GC+1d culture TGATATGAGC (3) 16 0.016 P8 GC+1d culture GACTGACGAG (2) 11.4 0.0114 P8 GC+1d culture GTGAAGGTGA (7) 4.6 0.0046 P8 GC+1d culture GCCAGAAAAA (10) 3.4 0.0034 P8 GC+1d culture TGCCATCACC (6) 3.4 0.0034 P8 GC+1d culture GGCAGAGAAG (5) 2.3 0.0023 P8 GC+1d culture CATACACACA (7) 1.1 0.0011 P8 GC+1d culture CCTGAAAAAA (5) 1.1 0.0011 P8 GC+1d culture CTTGAAAAAA (7) 1.1 0.0011 P8 GC+1d culture GCAGAAAAGC (4) 1.1 0.0011 P8 GC+1d culture GGGAAAAAAA (36) 1.1 0.0011 P8 GC+1d culture GTGGTGGACA (5) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TATTTAGTCC (2) 19.9 0.0199 P8 GC+SHH+1d culture GACTGACGAG (2) 17.6 0.0176 P8 GC+SHH+1d culture TGATATGAGC (3) 12.9 0.0129 P8 GC+SHH+1d culture GCCAGAAAAA (10) 8.2 0.0082 P8 GC+SHH+1d culture CTTGAAAAAA (7) 2.3 0.0023 P8 GC+SHH+1d culture GCAGAAAAGC (4) 2.3 0.0023 P8 GC+SHH+1d culture TGCCATCACC (6) 2.3 0.0023 P8 GC+SHH+1d culture CCTGAAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture GGCAAAAAAA (17) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAAAAAA (36) 1.2 0.0012 P8 GC+SHH+1d culture GGGAAGGGAA (14) 1.2 0.0012 P8 GC+SHH+1d culture GTGAAGGTGA (7) 1.2 0.0012 P8 GC+SHH+1d culture TGCCATCAAA (6) 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts GACTGACGAG (2) 3.5 0.0035 3T3 fibroblasts GGAGGACTCC (2) 3.5 0.0035 3T3 fibroblasts GTCACATTGG 3.5 0.0035 3T3 fibroblasts GTGAAGGTGA (7) 3.5 0.0035 3T3 fibroblasts GTGGTGGACA (5) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CATACACACA (7) 4.9 0.0049 E15 cortex GGAGGACTCC (2) 4.9 0.0049 E15 cortex GGCAAAAAGC (3) 4.9 0.0049 E15 cortex GGCAGAGAAG (5) 4.9 0.0049 E15 cortex GTGGTGGACA (5) 4.9 0.0049 E15 cortex TATTTAGTCC (2) 4.9 0.0049 E15 cortex TGATATGAGC (3) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex GGCAGAGAAG (5) 27.3 0.0273 P1 cortex TGATATGAGC (3) 18.2 0.0182 P1 cortex GGCAAAAAGC (3) 4.5 0.0045 P1 cortex GGGAAAAAAA (36) 4.5 0.0045 P1 cortex TGCCATCAAA (6) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGATATGAGC (3) 88.7 0.0887 Hypothalamus GGGAAAAAAA (36) 41.7 0.0417 Hypothalamus TATTTAGTCC (2) 10.9 0.0109 Hypothalamus GCCAGAAAAA (10) 7.2 0.0072 Hypothalamus GACTGACGAG (2) 3.6 0.0036 Hypothalamus GGCAAAAAAA (17) 3.6 0.0036 Hypothalamus GTGAAGGTGA (7) 3.6 0.0036 Hypothalamus TGCCATCAAA (6) 3.6 0.0036 Hypothalamus CATACACACA (7) 1.8 0.0018 Hypothalamus GAAGACCTCC (2) 1.8 0.0018 Hypothalamus GGAGGACTCC (2) 1.8 0.0018 Hypothalamus TGCCATCACC (6) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TGATATGAGC (3) 20.7 0.0207 E12.5 retina GACTGACGAG (2) 13.1 0.0131 E12.5 retina TATTTAGTCC (2) 9.4 0.0094 E12.5 retina GGTCCAGCCA (5) 3.8 0.0038 E12.5 retina GGGAAGGGAA (14) 1.9 0.0019 E12.5 retina GTGAAGGTGA (7) 1.9 0.0019 E12.5 retina TGCCATCACC (6) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina GACTGACGAG (2) 10.9 0.0109 E14.5 retina TGATATGAGC (3) 10.9 0.0109 E14.5 retina TATTTAGTCC (2) 9.1 0.0091 E14.5 retina GGTCCAGCCA (5) 5.5 0.0055 E14.5 retina TGCCATCACC (6) 5.5 0.0055 E14.5 retina GACTCGATGA 3.6 0.0036 E14.5 retina GGCAAAAAAA (17) 3.6 0.0036 E14.5 retina GCCAGAAAAA (10) 1.8 0.0018 E14.5 retina GGGAAAAAAA (36) 1.8 0.0018 E14.5 retina TGCCATCAAA (6) 1.8 0.0018 E16.5 retina TGATATGAGC (3) 45.3 0.0453 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TATTTAGTCC (2) 16.3 0.0163 E16.5 retina TGCCATCACC (6) 7.2 0.0072 E16.5 retina GGGAAAAAAA (36) 3.6 0.0036 E16.5 retina GGTCCAGCCA (5) 3.6 0.0036 E16.5 retina GTGAAGGTGA (7) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TATTTAGTCC (2) 25.5 0.0255 E18.5 retina GACTGACGAG (2) 14.6 0.0146 E18.5 retina TGATATGAGC (3) 14.6 0.0146 E18.5 retina TGCCATCACC (6) 7.3 0.0073 E18.5 retina CCTGAAAAAA (5) 5.5 0.0055 E18.5 retina GAAGACCTCC (2) 3.6 0.0036 E18.5 retina GCCAGAAAAA (10) 3.6 0.0036 E18.5 retina CTTGAAAAAA (7) 1.8 0.0018 E18.5 retina GGCAAAAAGC (3) 1.8 0.0018 E18.5 retina GGGAAAAAAA (36) 1.8 0.0018 E18.5 retina TGCCATCAAA (6) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGATATGAGC (3) 25.5 0.0255 P0.5 retina TATTTAGTCC (2) 7.9 0.0079 P0.5 retina GACTGACGAG (2) 5.9 0.0059 P0.5 retina GGGAAAAAAA (36) 3.9 0.0039 P0.5 retina TGCCATCACC (6) 3.9 0.0039 P0.5 retina GCCAGAAAAA (10) 2 0.002 P0.5 retina GGTCCAGCCA (5) 2 0.002 P0.5 retina GTGAAGGTGA (7) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TGATATGAGC (3) 29.9 0.0299 P2.5 retina GACTGACGAG (2) 24.6 0.0246 P2.5 retina GGGAAAAAAA (36) 7 0.007 P2.5 retina GCCAGAAAAA (10) 5.3 0.0053 P2.5 retina TGCCATCACC (6) 5.3 0.0053 P2.5 retina GGTCCAGCCA (5) 3.5 0.0035 P2.5 retina TATTTAGTCC (2) 3.5 0.0035 P2.5 retina GAAGACCTCC (2) 1.8 0.0018 P2.5 retina GGAGGACTCC (2) 1.8 0.0018 P2.5 retina GGGAAGGGAA (14) 1.8 0.0018 P2.5 retina GTGAAAGGAA (7) 1.8 0.0018 P2.5 retina GTGAAGGTGA (7) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGATATGAGC (3) 27.7 0.0277 P4.5 retina TATTTAGTCC (2) 19.8 0.0198 P4.5 retina GACTGACGAG (2) 17.8 0.0178 P4.5 retina TGCCATCACC (6) 15.9 0.0159 P4.5 retina GGGAAAAAAA (36) 9.9 0.0099 P4.5 retina GCCAGAAAAA (10) 5.9 0.0059 P4.5 retina GAAGACCTCC (2) 4 0.004 P4.5 retina GGTCCAGCCA (5) 4 0.004 P4.5 retina CATACACACA (7) 2 0.002 P4.5 retina GGCAAAAAAA (17) 2 0.002 P4.5 retina GTGAAGGTGA (7) 2 0.002 P4.5 retina TGCCATCAAA (6) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina GACTGACGAG (2) 26.7 0.0267 P6.5 retina GGGAAAAAAA (36) 20 0.02 P6.5 retina TATTTAGTCC (2) 18.3 0.0183 P6.5 retina TGATATGAGC (3) 16.7 0.0167 P6.5 retina TGCCATCACC (6) 6.7 0.0067 P6.5 retina GCCAGAAAAA (10) 3.3 0.0033 P6.5 retina GGCAGAGAAG (5) 3.3 0.0033 P6.5 retina GGGAAGGGAA (14) 3.3 0.0033 P6.5 retina GTGAAGGTGA (7) 3.3 0.0033 P6.5 retina CATACACACA (7) 1.7 0.0017 P6.5 retina GGCAAAAAAA (17) 1.7 0.0017 P6.5 retina GTGGTGGACA (5) 1.7 0.0017 P6.5 retina TGCCATCAAA (6) 1.7 0.0017 P10.5 crx- retina TGATATGAGC (3) 50.2 0.0502 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina GACTGACGAG (2) 16.7 0.0167 P10.5 crx- retina GGGAAAAAAA (36) 11.1 0.0111 P10.5 crx- retina GGCAGAGAAG (5) 5.6 0.0056 P10.5 crx- retina TATTTAGTCC (2) 5.6 0.0056 P10.5 crx- retina GGCAAAAAAA (17) 1.9 0.0019 P10.5 crx- retina GGCAAAAAGC (3) 1.9 0.0019 P10.5 crx- retina GTGAAGGTGA (7) 1.9 0.0019 P10.5 crx- retina TGCCATCAAA (6) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina GACTGACGAG (2) 25 0.025 P10.5 crx+ retina GGGAAAAAAA (36) 23.1 0.0231 P10.5 crx+ retina GCCAGAAAAA (10) 15.4 0.0154 P10.5 crx+ retina TGATATGAGC (3) 11.5 0.0115 P10.5 crx+ retina TATTTAGTCC (2) 7.7 0.0077 P10.5 crx+ retina GGCAAAAAAA (17) 3.8 0.0038 P10.5 crx+ retina TGCCATCACC (6) 3.8 0.0038 P10.5 crx+ retina CATACACACA (7) 1.9 0.0019 P10.5 crx+ retina CCTGAAAAAA (5) 1.9 0.0019 P10.5 crx+ retina GCAGAAAAGC (4) 1.9 0.0019 P10.5 crx+ retina GGCAGAGAAG (5) 1.9 0.0019 P10.5 crx+ retina GGTCCAGCCA (5) 1.9 0.0019 P10.5 crx+ retina GTCACATTGG 1.9 0.0019 P10.5 crx+ retina TGCCATCAAA (6) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal GGGAAAAAAA (36) 35.2 0.0352 Adult retinal TGATATGAGC (3) 24.1 0.0241 Adult retinal TATTTAGTCC (2) 11.1 0.0111 Adult retinal GACTGACGAG (2) 9.3 0.0093 Adult retinal TGCCATCACC (6) 7.4 0.0074 Adult retinal GCCAGAAAAA (10) 5.6 0.0056 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL GGGAAAAAAA (36) 30.6 0.0306 ONL GACTGACGAG (2) 19.2 0.0192 ONL TGATATGAGC (3) 7.7 0.0077 ONL TATTTAGTCC (2) 5.7 0.0057 ONL TGCCATCAAA (6) 5.7 0.0057 ONL CATACACACA (7) 3.8 0.0038 ONL GCCAGAAAAA (10) 3.8 0.0038 ONL GGGAAGGGAA (14) 3.8 0.0038 ONL GGGAGAAGAA (6) 3.8 0.0038 ONL GTGAAAGGAA (7) 1.9 0.0019 ONL TGCCATCACC (6) 1.9 0.0019