Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.9870
2610528M18Rik
RIKEN cDNA 2610528M18 gene
17
83815
Human Homolog
C6orf139[chromosome 6 open reading frame 139]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ATGTAATAAA
(
3
)
6.5
0.0065
P8 Cb GC
GCTGAGGGCT
(
6
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TTATATTTTT (
6
)
6.9
0.0069
Cb medulloblastoma
ATGTAAAAAA
(
6
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
ATGTAATAAA
(
3
)
3.4
0.0034
P8 GC+1d culture
GCTGAGGGCT
(
6
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
ATGTAATAAA
(
3
)
8.2
0.0082
P8 GC+SHH+1d culture
ATGTAATAGT
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
ATGTAAAAAA
(
6
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
GCTGAGGGCT
(
6
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TTATATTTTT (
6
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
ATGTAATAAA
(
3
)
5.6
0.0056
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
ATGTAATAAA
(
3
)
10.9
0.0109
E14.5 retina
GCATTTTTTT (
9
)
1.8
0.0018
E14.5 retina
GCTGAGGGCT
(
6
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
ATGTAATAAA
(
3
)
3.6
0.0036
E16.5 retina
TTATATTTTT (
6
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
ATGTAATAAA
(
3
)
5.5
0.0055
E18.5 retina
ATGTAAAAAA
(
6
)
3.6
0.0036
E18.5 retina
TTATATTTTT (
6
)
3.6
0.0036
E18.5 retina
ATGTAATAGT
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
ATGTAATAAA
(
3
)
2
0.002
P0.5 retina
ATGTAATAGT
(
4
)
2
0.002
P0.5 retina
GCTGAGGGCT
(
6
)
2
0.002
P0.5 retina
TTATATTTTT (
6
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
ATGTAATAAA
(
3
)
3.5
0.0035
P2.5 retina
ATGTAATAGT
(
4
)
1.8
0.0018
P2.5 retina
TTATATTTTT (
6
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
ATGTAAAAAA
(
6
)
5.9
0.0059
P4.5 retina
ATGTAATAAA
(
3
)
4
0.004
P4.5 retina
TTATATTTTT (
6
)
4
0.004
P4.5 retina
GCATTTTTTT (
9
)
2
0.002
P4.5 retina
GCTGAGGGCT
(
6
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GCATTTTTTT (
9
)
1.7
0.0017
P6.5 retina
TTATATTTTT (
6
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
GCTGAGGGCT
(
6
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TTATATTTTT (
6
)
1.9
0.0019
