Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.9925	Idh1	isocitrate dehydrogenase 1 (NADP+), soluble	1	1 29.8 cM	15926
Gene Ontology	cytosol | glutathione metabolism | glyoxylate cycle | isocitrate dehydrogenase (NADP+) activity | isocitrate dehydrogenase (NADP+) activity | main pathways of carbohydrate metabolism | metabolism | oxidoreductase activity | response to oxidative stress | tricarboxylic acid cycle
Human Homolog	IDH1[isocitrate dehydrogenase 1 (NADP+), soluble]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 47 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCAATAATG (2) 4.9 0.0049 Cb medulloblastoma GGCAATAATG (2) 2.3 0.0023 P8 GC+1d culture GGCAATAATG (2) 11.4 0.0114 P8 GC+1d culture GTGGGCCCAG (5) 3.4 0.0034 P8 GC+1d culture GACAACAGGG (3) 2.3 0.0023 P8 GC+1d culture TACCAGAAAG (5) 2.3 0.0023 P8 GC+1d culture TATGTGTCCA 1.1 0.0011 P8 GC+SHH+1d culture GGCAATAATG (2) 4.7 0.0047 P8 GC+SHH+1d culture GACAACAGGG (3) 1.2 0.0012 P8 GC+SHH+1d culture TATGTGTCCA 1.2 0.0012 3T3 fibroblasts GGCAATAATG (2) 10.5 0.0105 E15 cortex GGCAATAATG (2) 14.8 0.0148 P1 cortex GGCAATAATG (2) 18.2 0.0182 P1 cortex TGGCCAAGCT (2) 9.1 0.0091 Hypothalamus GGCAATAATG (2) 3.6 0.0036 Hypothalamus GACAACAGGG (3) 1.8 0.0018 E12.5 retina TACCAGAAAG (5) 9.4 0.0094 E12.5 retina GGCAATAATG (2) 5.6 0.0056 E14.5 retina GGCAATAATG (2) 10.9 0.0109 E16.5 retina GGCAATAATG (2) 14.5 0.0145 E16.5 retina GACAACAGGG (3) 1.8 0.0018 E16.5 retina TATGTGTCCA 1.8 0.0018 E18.5 retina GGCAATAATG (2) 7.3 0.0073 P0.5 retina GGCAATAATG (2) 21.6 0.0216 P2.5 retina GGCAATAATG (2) 15.8 0.0158 P2.5 retina TACCAGAAAG (5) 1.8 0.0018 P4.5 retina GGCAATAATG (2) 9.9 0.0099 P4.5 retina GACAACAGGG (3) 2 0.002 P4.5 retina GTGGGCCCAG (5) 2 0.002 P4.5 retina TACCAGAAAG (5) 2 0.002 P4.5 retina TGACTTTTTT (5) 2 0.002 P6.5 retina GGCAATAATG (2) 8.3 0.0083 P6.5 retina CTCCAATGTA 1.7 0.0017 P6.5 retina GTGGGCCCAG (5) 1.7 0.0017 P6.5 retina TGACTTTTTT (5) 1.7 0.0017 P10.5 crx- retina GGCAATAATG (2) 5.6 0.0056 P10.5 crx+ retina GGCAATAATG (2) 5.8 0.0058 P10.5 crx+ retina TGGCCAAGCT (2) 3.8 0.0038 P10.5 crx+ retina TACCAGAAAG (5) 1.9 0.0019 Adult retinal TACCAGAAAG (5) 7.4 0.0074 Adult retinal GACAACAGGG (3) 1.9 0.0019 Adult retinal GGCAATAATG (2) 1.9 0.0019 ONL TACCAGAAAG (5) 7.7 0.0077 ONL AGGCCAGGTG 5.7 0.0057 ONL CTCCAATGTA 1.9 0.0019 ONL GGCAATAATG (2) 1.9 0.0019 ONL TGACTTTTTT (5) 1.9 0.0019