Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.998	Psen1	presenilin 1	12	12 37.0 cM	19164
Gene Ontology	apoptosis | blood vessel development | endoplasmic reticulum | Golgi apparatus | heart development | integral to membrane | intracellular signaling cascade | membrane | neuronal migration | nucleus | positive regulation of protein kinase activity | protein binding
Human Homolog	PSEN1[presenilin 1 (Alzheimer disease 3)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 28 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTGGAAATAA (2) 4.9 0.0049 Cb medulloblastoma TGATGCAAAT 4.6 0.0046 P8 GC+1d culture TGATGCAAAT TTGGAAATAA (2) 6.8 0.0068 P8 GC+SHH+1d culture TGATGCAAAT TTGGAAATAA (2) 4.7 0.0047 P1 cortex TGATGCAAAT TTGGAAATAA (2) 9 0.009 Hypothalamus TTGGAAATAA (2) 3.6 0.0036 E12.5 retina TGATGCAAAT TTGGAAATAA (2) 5.7 0.0057 E14.5 retina TGATGCAAAT TTGGAAATAA (2) 9.1 0.0091 E16.5 retina TGATGCAAAT TTGGAAATAA (2) 7.2 0.0072 E18.5 retina TTGGAAATAA (2) 5.5 0.0055 P0.5 retina TGATGCAAAT 2 0.002 P2.5 retina TGATGCAAAT TTGGAAATAA (2) 8.8 0.0088 P4.5 retina TGATGCAAAT TTGGAAATAA (2) 11.8 0.0118 P6.5 retina TTGGAAATAA (2) 5 0.005 P10.5 crx- retina TTGGAAATAA (2) 3.7 0.0037 P10.5 crx+ retina GATCCAGGGG TGATGCAAAT TTGGAAATAA (2) 9.6 0.0096 Adult retinal GATCCAGGGG 1.9 0.0019 ONL AGAGAAAGAA (2) 3.8 0.0038