Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.100113	Rnu70	RNA, U70 small nucleolar			104368
Mm.100113	Rpl10	ribosomal protein 10	X	X 29.82 cM	110954
Gene Ontology	intracellular | protein biosynthesis | ribosome | structural constituent of ribosome
Human Homolog	RPL10[ribosomal protein L10]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 226 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTTGCTGAGA (3) 55.5 0.0555 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GACACCAGAG (7) 9.8 0.0098 P8 Cb GC GGCCGCCGCC (4) 6.5 0.0065 P8 Cb GC CCTGACTGGC (6) 4.9 0.0049 P8 Cb GC GGCCCCGCCC (6) 4.9 0.0049 P8 Cb GC AATCTTTTTC (5) 1.6 0.0016 P8 Cb GC ATGACAATAG (3) 1.6 0.0016 P8 Cb GC GGCCGCCGGC (5) 1.6 0.0016 P8 Cb GC GTTGTTGAGA (3) 1.6 0.0016 P8 Cb GC GTTTGCCTGA (9) 1.6 0.0016 P8 Cb GC TCATCCGTAT (2) 1.6 0.0016 P8 Cb GC TCCATCCGAA (4) 1.6 0.0016 P8 Cb GC TGATTGAGGC (2) 1.6 0.0016 Cb medulloblastoma GACACCAGAG (7) 48.6 0.0486 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GTTGCTGAGA (3) 9.2 0.0092 Cb medulloblastoma GTTGTTGAGA (3) 4.6 0.0046 Cb medulloblastoma ATGTTGTCAC (3) 2.3 0.0023 Cb medulloblastoma GGCCCCGCCC (6) 2.3 0.0023 Cb medulloblastoma TGCCTTGTCC (4) 2.3 0.0023 P8 GC+1d culture GTTGCTGAGA (3) 81.1 0.0811 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GGCCCCGCCC (6) 5.7 0.0057 P8 GC+1d culture AATCTTTTTC (5) 4.6 0.0046 P8 GC+1d culture GACACCAGAG (7) 4.6 0.0046 P8 GC+1d culture TGCCTTGTCC (4) 3.4 0.0034 P8 GC+1d culture ATGTTGTCAC (3) 2.3 0.0023 P8 GC+1d culture GTTTGCCTGA (9) 2.3 0.0023 P8 GC+1d culture ATGACAATAG (3) 1.1 0.0011 P8 GC+1d culture GAAAGGGTGG (6) 1.1 0.0011 P8 GC+1d culture GTTGCTGGAA (4) 1.1 0.0011 P8 GC+1d culture TATTTGTTGG (3) 1.1 0.0011 P8 GC+1d culture TCATCCGTAT (2) 1.1 0.0011 P8 GC+1d culture TCCATCCGAA (4) 1.1 0.0011 P8 GC+1d culture TCTTCAAATT (3) 1.1 0.0011 P8 GC+1d culture TTTTCAAATT (6) 1.1 0.0011 P8 GC+SHH+1d culture GTTGCTGAGA (3) 87.8 0.0878 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GGCCCCGCCC (6) 10.5 0.0105 P8 GC+SHH+1d culture GACACCAGAG (7) 9.4 0.0094 P8 GC+SHH+1d culture GTTGCTGGAA (4) 5.9 0.0059 P8 GC+SHH+1d culture ATGTTGTCAC (3) 3.5 0.0035 P8 GC+SHH+1d culture TATTTGTTGG (3) 3.5 0.0035 P8 GC+SHH+1d culture TCTTCAAATT (3) 3.5 0.0035 P8 GC+SHH+1d culture AATCTTTTTC (5) 2.3 0.0023 P8 GC+SHH+1d culture ATGACAATAG (3) 2.3 0.0023 P8 GC+SHH+1d culture CCTGACTGGC (6) 1.2 0.0012 P8 GC+SHH+1d culture TGCCTTGTCC (4) 1.2 0.0012 3T3 fibroblasts GTTGCTGAGA (3) 140.2 0.1402 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts TGCCTTGTCC (4) 17.5 0.0175 3T3 fibroblasts GACACCAGAG (7) 10.5 0.0105 3T3 fibroblasts GTTTGCCTGA (9) 10.5 0.0105 3T3 fibroblasts GGCCCCGCCC (6) 3.5 0.0035 E15 cortex GTTGCTGAGA (3) 113.8 0.1138 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GGCCCCGCCC (6) 29.7 0.0297 E15 cortex GACACCAGAG (7) 14.8 0.0148 E15 cortex GTTTGCCTGA (9) 9.9 0.0099 E15 cortex CCTGACTGGC (6) 4.9 0.0049 E15 cortex GTTCCTGAAA (3) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GTTGCTGAGA (3) 81.8 0.0818 P1 cortex GACACCAGAG (7) 36.4 0.0364 P1 cortex TGCCTTGTCC (4) 9.1 0.0091 P1 cortex CCTGACTGGC (6) 4.5 0.0045 P1 cortex GTTTGCCTGA (9) 4.5 0.0045 Hypothalamus GACACCAGAG (7) 45.3 0.0453 Hypothalamus GTTGCTGAGA (3) 34.4 0.0344 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTTCCTGAAA (3) 3.6 0.0036 Hypothalamus TATTTGTTGG (3) 3.6 0.0036 Hypothalamus GGCCCCGCCC (6) 1.8 0.0018 Hypothalamus GTTGCTGAAA (2) 1.8 0.0018 Hypothalamus GTTGCTGGAA (4) 1.8 0.0018 Hypothalamus TCATCCGTAT (2) 1.8 0.0018 Hypothalamus TCTTCAAATT (3) 1.8 0.0018 Hypothalamus TGATTGAGGC (2) 1.8 0.0018 E12.5 retina GTTGCTGAGA (3) 163.3 0.1633 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GGTGCTGAGA (6) 9.4 0.0094 E12.5 retina CCTGACTGGC (6) 7.5 0.0075 E12.5 retina ATGACAATAG (3) 5.6 0.0056 E12.5 retina GTTGCTGGAA (4) 5.6 0.0056 E12.5 retina GTTGCTGAAA (2) 3.8 0.0038 E12.5 retina GGCCCCGCCC (6) 1.9 0.0019 E12.5 retina GGCCGCCGCC (4) 1.9 0.0019 E12.5 retina TATTTGTTGG (3) 1.9 0.0019 E12.5 retina TGCCTTGTCC (4) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTTGCTGAGA (3) 63.8 0.0638 E14.5 retina GACACCAGAG (7) 29.2 0.0292 E14.5 retina CCTGACTGGC (6) 7.3 0.0073 E14.5 retina GTTTGCCTGA (9) 3.6 0.0036 E14.5 retina TATTTGTTGG (3) 3.6 0.0036 E14.5 retina TCATCCGTAT (2) 3.6 0.0036 E14.5 retina AATCTTTTTC (5) 1.8 0.0018 E14.5 retina ATGTTGTCAC (3) 1.8 0.0018 E14.5 retina GAAAGGGTGG (6) 1.8 0.0018 E14.5 retina TCCATCCGAA (4) 1.8 0.0018 E14.5 retina TCTTCAAATT (3) 1.8 0.0018 E14.5 retina TGATTGAGGC (2) 1.8 0.0018 E14.5 retina TTCCTTGTTC (3) 1.8 0.0018 E14.5 retina TTTTCAAATT (6) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTTGCTGAGA (3) 54.3 0.0543 E16.5 retina GACACCAGAG (7) 21.7 0.0217 E16.5 retina TTCCTTGTTC (3) 7.2 0.0072 E16.5 retina GTAAAGAGTT (5) 5.4 0.0054 E16.5 retina AATCTTTTTC (5) 3.6 0.0036 E16.5 retina TATTTGTTGG (3) 3.6 0.0036 E16.5 retina ATGACAATAG (3) 1.8 0.0018 E16.5 retina ATGTTGTCAC (3) 1.8 0.0018 E16.5 retina CCTGACTGGC (6) 1.8 0.0018 E16.5 retina GAAAGGGTGG (6) 1.8 0.0018 E16.5 retina GGCCCCGCCC (6) 1.8 0.0018 E16.5 retina GGTGCTGAGA (6) 1.8 0.0018 E16.5 retina TCATCCGTAT (2) 1.8 0.0018 E16.5 retina TGATTGAGGC (2) 1.8 0.0018 E16.5 retina TGCCTTGTCC (4) 1.8 0.0018 E16.5 retina TTTTCAAATT (6) 1.8 0.0018 E18.5 retina GTTGCTGAGA (3) 67.3 0.0673 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GACACCAGAG (7) 16.4 0.0164 E18.5 retina GTTGCTGAAA (2) 3.6 0.0036 E18.5 retina TCTTCAAATT (3) 3.6 0.0036 E18.5 retina TTCCTTGTTC (3) 3.6 0.0036 E18.5 retina ATGACAATAG (3) 1.8 0.0018 E18.5 retina CCTGACTGGC (6) 1.8 0.0018 E18.5 retina GGCCCCGCCC (6) 1.8 0.0018 E18.5 retina GGCCGCCGGC (5) 1.8 0.0018 E18.5 retina GTTTGCCTGA (9) 1.8 0.0018 P0.5 retina GTTGCTGAGA (3) 92.2 0.0922 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina ATGACAATAG (3) 5.9 0.0059 P0.5 retina TGATTGAGGC (2) 3.9 0.0039 P0.5 retina TTCCTTGTTC (3) 3.9 0.0039 P0.5 retina ATGTTGTCAC (3) 2 0.002 P0.5 retina GACACCAGAG (7) 2 0.002 P0.5 retina GGCCCCGCCC (6) 2 0.002 P0.5 retina GGTGCTGAGA (6) 2 0.002 P0.5 retina GTTGCTGAAA (2) 2 0.002 P0.5 retina GTTGCTGGAA (4) 2 0.002 P0.5 retina GTTGTTGAGA (3) 2 0.002 P0.5 retina GTTTGCCTGA (9) 2 0.002 P0.5 retina TTTTCAAATT (6) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GTTGCTGAGA (3) 49.3 0.0493 P2.5 retina GACACCAGAG (7) 12.3 0.0123 P2.5 retina TTCCTTGTTC (3) 5.3 0.0053 P2.5 retina ATGACAATAG (3) 3.5 0.0035 P2.5 retina AATCTTTTTC (5) 1.8 0.0018 P2.5 retina CCTGACTGGC (6) 1.8 0.0018 P2.5 retina GGCCCCGCCC (6) 1.8 0.0018 P2.5 retina GGTGCTGAGA (6) 1.8 0.0018 P2.5 retina GTTGCTGGAA (4) 1.8 0.0018 P2.5 retina GTTGTTGAGA (3) 1.8 0.0018 P2.5 retina GTTTGCCTGA (9) 1.8 0.0018 P2.5 retina TGATTGAGGC (2) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GTTGCTGAGA (3) 39.6 0.0396 P4.5 retina GACACCAGAG (7) 19.8 0.0198 P4.5 retina TTCCTTGTTC (3) 5.9 0.0059 P4.5 retina AATCTTTTTC (5) 4 0.004 P4.5 retina GTTCCTGAAA (3) 4 0.004 P4.5 retina ATGTTGTCAC (3) 2 0.002 P4.5 retina GGCCCCGCCC (6) 2 0.002 P4.5 retina GGCCGCCGGC (5) 2 0.002 P4.5 retina GTTGCTGAAA (2) 2 0.002 P4.5 retina GTTTGCCTGA (9) 2 0.002 P4.5 retina TATTTGTTGG (3) 2 0.002 P4.5 retina TGCCTTGTCC (4) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GTTGCTGAGA (3) 33.3 0.0333 P6.5 retina GACACCAGAG (7) 16.7 0.0167 P6.5 retina TTCCTTGTTC (3) 6.7 0.0067 P6.5 retina AATCTTTTTC (5) 3.3 0.0033 P6.5 retina ATGACAATAG (3) 3.3 0.0033 P6.5 retina GGTGCTGAGA (6) 3.3 0.0033 P6.5 retina GTTCCTGAAA (3) 1.7 0.0017 P6.5 retina GTTGCTGAAA (2) 1.7 0.0017 P6.5 retina GTTGTTGAGA (3) 1.7 0.0017 P6.5 retina TATTTGTTGG (3) 1.7 0.0017 P6.5 retina TCTTCAAATT (3) 1.7 0.0017 P6.5 retina TGCCTTGTCC (4) 1.7 0.0017 P6.5 retina TTTTCAAATT (6) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GTTGCTGAGA (3) 48.3 0.0483 P10.5 crx- retina GACACCAGAG (7) 14.9 0.0149 P10.5 crx- retina CCTGACTGGC (6) 3.7 0.0037 P10.5 crx- retina AATCTTTTTC (5) 1.9 0.0019 P10.5 crx- retina ATGTTGTCAC (3) 1.9 0.0019 P10.5 crx- retina GGCCCCGCCC (6) 1.9 0.0019 P10.5 crx- retina GTTGCTGAAA (2) 1.9 0.0019 P10.5 crx- retina GTTTGCCTGA (9) 1.9 0.0019 P10.5 crx- retina TATTTGTTGG (3) 1.9 0.0019 P10.5 crx- retina TCATCCGTAT (2) 1.9 0.0019 P10.5 crx- retina TGATTGAGGC (2) 1.9 0.0019 P10.5 crx- retina TTTTCAAATT (6) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GTTGCTGAGA (3) 38.4 0.0384 P10.5 crx+ retina GACACCAGAG (7) 21.1 0.0211 P10.5 crx+ retina GGCCCCGCCC (6) 3.8 0.0038 P10.5 crx+ retina GTTTGCCTGA (9) 3.8 0.0038 P10.5 crx+ retina ATGACAATAG (3) 1.9 0.0019 P10.5 crx+ retina ATGTTGTCAC (3) 1.9 0.0019 P10.5 crx+ retina CCTGACTGGC (6) 1.9 0.0019 P10.5 crx+ retina GTTGCTGAAA (2) 1.9 0.0019 P10.5 crx+ retina GTTGTTGAGA (3) 1.9 0.0019 P10.5 crx+ retina TGCCTTGTCC (4) 1.9 0.0019 P10.5 crx+ retina TTTTCAAATT (6) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GTTGCTGAGA (3) 16.7 0.0167 Adult retinal GACACCAGAG (7) 14.8 0.0148 Adult retinal CCTGACTGGC (6) 1.9 0.0019 Adult retinal GGCCGCCGGC (5) 1.9 0.0019 Adult retinal TATTTGTTGG (3) 1.9 0.0019 Adult retinal TTCCTTGTTC (3) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTTGCTGAGA (3) 11.5 0.0115 ONL ATGACAATAG (3) 1.9 0.0019 ONL GTTGCTGAAA (2) 1.9 0.0019 ONL TGATTGAGGC (2) 1.9 0.0019 ONL TGCCTTGTCC (4) 1.9 0.0019 ONL TTTTCAAATT (6) 1.9 0.0019