Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.10141	Atrx	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	X	X 43.8 cM	22589
Mm.10141	DXErtd223e	DNA segment, Chr X, ERATO Doi 223, expressed	X	X 42.0 cM	52197
Mm.10141	4833408C14Rik	RIKEN cDNA 4833408C14 gene	X		67403
Mm.10141	E030036C24Rik	RIKEN cDNA E030036C24 gene	X		319432
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAACAATGT (4) 1.6 0.0016 P8 Cb GC GAGGAGTGGC (7) 1.6 0.0016 P8 Cb GC GGAATTTTTA (5) 1.6 0.0016 P8 Cb GC TGAAAAGAAG (7) 1.6 0.0016 Cb medulloblastoma TGTGTATGAA (5) 6.9 0.0069 Cb medulloblastoma TAATTATTTG (6) 2.3 0.0023 P8 GC+1d culture GGAATTTTTA (5) 2.3 0.0023 P8 GC+1d culture ATTCTCTTTT (7) 1.1 0.0011 P8 GC+1d culture ATTTCAAAAA (10) 1.1 0.0011 P8 GC+1d culture GAGGAGTGGC (7) 1.1 0.0011 P8 GC+1d culture GGAATTTTTT (7) 1.1 0.0011 P8 GC+1d culture TGAAAAGAAG (7) 1.1 0.0011 P8 GC+1d culture TGTGTATGAA (5) 1.1 0.0011 P8 GC+SHH+1d culture GGAATTTTTA (5) 2.3 0.0023 P8 GC+SHH+1d culture GGAATTTTTT (7) 2.3 0.0023 P8 GC+SHH+1d culture TGAAAAGAAG (7) 2.3 0.0023 P8 GC+SHH+1d culture ATTTCAAAAA (10) 1.2 0.0012 P8 GC+SHH+1d culture GTTCCCTGAG (6) 1.2 0.0012 3T3 fibroblasts ATTCTCTTTT (7) 3.5 0.0035 P1 cortex AAAACAATGT (4) 4.5 0.0045 P1 cortex GGAATTTTTA (5) 4.5 0.0045 Hypothalamus ATTCTCTTTT (7) 1.8 0.0018 Hypothalamus GAGGAGTGGC (7) 1.8 0.0018 Hypothalamus TAATTATTTG (6) 1.8 0.0018 E12.5 retina GTTCCCTGAG (6) 3.8 0.0038 E12.5 retina TGAAAAGAAG (7) 3.8 0.0038 E12.5 retina AAAACAATGT (4) 1.9 0.0019 E12.5 retina TAATTATTTG (6) 1.9 0.0019 E14.5 retina ATTCTCTTTT (7) 1.8 0.0018 E14.5 retina TAATTATTTG (6) 1.8 0.0018 E16.5 retina GGAATTTTTA (5) 3.6 0.0036 E16.5 retina TGAAAAGAAG (7) 3.6 0.0036 E18.5 retina TGAAAAGAAG (7) 3.6 0.0036 E18.5 retina ATTCTCTTTT (7) 1.8 0.0018 E18.5 retina GGAATTTTTA (5) 1.8 0.0018 E18.5 retina TAATTATTTG (6) 1.8 0.0018 P0.5 retina GGAATTTTTA (5) 5.9 0.0059 P0.5 retina TGAAAAGAAG (7) 2 0.002 P2.5 retina ATTTCAAAAA (10) 1.8 0.0018 P2.5 retina TGAAAAGAAG (7) 1.8 0.0018 P4.5 retina TAATTATTTG (6) 4 0.004 P4.5 retina TGAAAAGAAG (7) 2 0.002 P10.5 crx- retina ATTTCAAAAA (10) 1.9 0.0019 P10.5 crx- retina GAGGAGTGGC (7) 1.9 0.0019 P10.5 crx- retina TAATTATTTG (6) 1.9 0.0019 P10.5 crx+ retina TGTGTATGAA (5) 5.8 0.0058 P10.5 crx+ retina ATTTCAAAAA (10) 1.9 0.0019 P10.5 crx+ retina GGAATTTTTA (5) 1.9 0.0019 P10.5 crx+ retina TAATTATTTG (6) 1.9 0.0019 Adult retinal TGAAAAGAAG (7) 1.9 0.0019 ONL GAGGAGTGGC (7) 1.9 0.0019 ONL TGTGTATGAA (5) 1.9 0.0019