Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.104919	Bcas2	breast carcinoma amplified sequence 2	3		68183
Gene Ontology	biological_process unknown | molecular_function unknown | spliceosome complex
Human Homolog	BCAS2[breast carcinoma amplified sequence 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAAAAAAAAA (196) 47.3 0.0473 P8 Cb GC TTCTGGAAGC (3) 13.1 0.0131 P8 Cb GC TTGCTGTTTT 3.3 0.0033 P8 Cb GC TTGGATGCCT (2) 3.3 0.0033 Cb medulloblastoma TAAAAAAAAA (196) 106.4 0.1064 Cb medulloblastoma TTCTGGAAGC (3) 18.5 0.0185 Cb medulloblastoma TAACACCACA (3) 2.3 0.0023 Cb medulloblastoma TTGCTGTTTT 2.3 0.0023 P8 GC+1d culture TAAAAAAAAA (196) 66.2 0.0662 P8 GC+1d culture TTCTGGAAGC (3) 9.1 0.0091 P8 GC+1d culture TTGCTGTTTT 4.6 0.0046 P8 GC+1d culture TTGGATGCCT (2) 3.4 0.0034 P8 GC+SHH+1d culture TAAAAAAAAA (196) 93.7 0.0937 P8 GC+SHH+1d culture TTCTGGAAGC (3) 21.1 0.0211 P8 GC+SHH+1d culture TTGCTGTTTT 3.5 0.0035 P8 GC+SHH+1d culture TTGGATGCCT (2) 3.5 0.0035 3T3 fibroblasts TAAAAAAAAA (196) 7 0.007 E15 cortex TAAAAAAAAA (196) 9.9 0.0099 P1 cortex TAAAAAAAAA (196) 50 0.05 P1 cortex GCAGCTTACA (10) 4.5 0.0045 Hypothalamus TAAAAAAAAA (196) 32.6 0.0326 Hypothalamus TTCTGGAAGC (3) 9.1 0.0091 Hypothalamus TTGCTGTTTT 7.2 0.0072 Hypothalamus TTGGATGCCT (2) 3.6 0.0036 E12.5 retina TAAAAAAAAA (196) 24.4 0.0244 E12.5 retina TTCTGGAAGC (3) 20.7 0.0207 E12.5 retina TTGGATGCCT (2) 9.4 0.0094 E12.5 retina GCAGCTTACA (10) 1.9 0.0019 E14.5 retina TAAAAAAAAA (196) 41.9 0.0419 E14.5 retina TTCTGGAAGC (3) 14.6 0.0146 E14.5 retina GCAGCTTACA (10) 3.6 0.0036 E14.5 retina TTGCTGTTTT 3.6 0.0036 E14.5 retina TTGGATGCCT (2) 1.8 0.0018 E16.5 retina TAAAAAAAAA (196) 23.5 0.0235 E16.5 retina TTCTGGAAGC (3) 18.1 0.0181 E16.5 retina TTGGATGCCT (2) 1.8 0.0018 E18.5 retina TAAAAAAAAA (196) 107.3 0.1073 E18.5 retina TTCTGGAAGC (3) 32.7 0.0327 E18.5 retina TTGGATGCCT (2) 5.5 0.0055 E18.5 retina GCAGCTTACA (10) 1.8 0.0018 E18.5 retina TTGCTGTTTT 1.8 0.0018 P0.5 retina TAAAAAAAAA (196) 37.3 0.0373 P0.5 retina TTCTGGAAGC (3) 13.7 0.0137 P0.5 retina GCAGCTTACA (10) 7.9 0.0079 P0.5 retina TTGGATGCCT (2) 5.9 0.0059 P2.5 retina TAAAAAAAAA (196) 72.2 0.0722 P2.5 retina TTCTGGAAGC (3) 19.4 0.0194 P2.5 retina TTGCTGTTTT 3.5 0.0035 P4.5 retina TAAAAAAAAA (196) 122.8 0.1228 P4.5 retina TTCTGGAAGC (3) 17.8 0.0178 P4.5 retina TTGCTGTTTT 13.9 0.0139 P4.5 retina TTGGATGCCT (2) 7.9 0.0079 P4.5 retina GCAGCTTACA (10) 2 0.002 P6.5 retina TAAAAAAAAA (196) 63.4 0.0634 P6.5 retina TTCTGGAAGC (3) 16.7 0.0167 P6.5 retina TTGGATGCCT (2) 3.3 0.0033 P6.5 retina GCAGCTTACA (10) 1.7 0.0017 P6.5 retina TTGCTGTTTT 1.7 0.0017 P10.5 crx- retina TAAAAAAAAA (196) 9.3 0.0093 P10.5 crx- retina TTCTGGAAGC (3) 5.6 0.0056 P10.5 crx- retina GCAGCTTACA (10) 1.9 0.0019 P10.5 crx+ retina TAAAAAAAAA (196) 25 0.025 P10.5 crx+ retina TTCTGGAAGC (3) 11.5 0.0115 P10.5 crx+ retina TAACACCACA (3) 7.7 0.0077 P10.5 crx+ retina GCAGCTTACA (10) 5.8 0.0058 P10.5 crx+ retina TTGCTGTTTT 3.8 0.0038 Adult retinal TAAAAAAAAA (196) 18.5 0.0185 Adult retinal TTCTGGAAGC (3) 7.4 0.0074 Adult retinal TTGCTGTTTT 1.9 0.0019 ONL TAAAAAAAAA (196) 28.7 0.0287 ONL TTGGATGCCT (2) 7.7 0.0077 ONL TTCTGGAAGC (3) 5.7 0.0057 ONL GCAGCTTACA (10) 1.9 0.0019