Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.116713	1110050P16Rik	RIKEN cDNA 1110050P16 gene	9		68791
Mm.116713	Npat	nuclear protein in the AT region	9	9 30.0 cM	244879
Human Homolog	NPAT[nuclear protein, ataxia-telangiectasia locus]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 24 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTATATTGT (3) 3.3 0.0033 P8 Cb GC TATGTGTGTA (5) 1.6 0.0016 Cb medulloblastoma TGTATATTGT (3) 4.6 0.0046 P8 GC+1d culture TGTATATTGT (3) 4.6 0.0046 P8 GC+SHH+1d culture TATGTGTGTA (5) 1.2 0.0012 P8 GC+SHH+1d culture TGTATATTGT (3) 1.2 0.0012 Hypothalamus CTCTTTTCTA (3) 3.6 0.0036 Hypothalamus TGTATATTGT (3) 3.6 0.0036 E12.5 retina CTCTTTTCTA (3) 1.9 0.0019 E12.5 retina TGTATATTGT (3) 1.9 0.0019 E14.5 retina TGTATATTGT (3) 3.6 0.0036 E14.5 retina TATGTGTGTA (5) 1.8 0.0018 E18.5 retina TGTATATTGT (3) 3.6 0.0036 P0.5 retina TGTATATTGT (3) 2 0.002 P2.5 retina CTCTTTTCTA (3) 3.5 0.0035 P2.5 retina TGTATATTGT (3) 1.8 0.0018 P6.5 retina CTGTTACCCT (5) 3.3 0.0033 P6.5 retina TGTATATTGT (3) 1.7 0.0017 P10.5 crx- retina CTGTTACCCT (5) 1.9 0.0019 P10.5 crx- retina TGTATATTGT (3) 1.9 0.0019 P10.5 crx+ retina TATGTGTGTA (5) 1.9 0.0019 P10.5 crx+ retina TGTATATTGT (3) 1.9 0.0019 ONL CTCTTTTCTA (3) 1.9 0.0019 ONL CTGTTACCCT (5) 1.9 0.0019