Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.11780	AU021895	expressed sequence AU021895	13		105290
Mm.11780	Tm7sf1	transmembrane 7 superfamily member 1	13	13 6.0 cM	83924
Gene Ontology	integral to membrane
Human Homolog	TM7SF1[transmembrane 7 superfamily member 1 (upregulated in kidney)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCAACAGCA (4) 22.8 0.0228 P8 Cb GC TCAGCAATAA (2) 1.6 0.0016 Cb medulloblastoma CTCAACAGCA (4) 6.9 0.0069 Cb medulloblastoma TCAGCAATAA (2) 4.6 0.0046 Cb medulloblastoma AATGCTGACA (6) 2.3 0.0023 P8 GC+1d culture CTCAACAGCA (4) 19.4 0.0194 P8 GC+1d culture TCAGCAATAA (2) 11.4 0.0114 P8 GC+1d culture GCTCCACAGG (4) 1.1 0.0011 P8 GC+1d culture GTCTGTACGT (2) 1.1 0.0011 P8 GC+1d culture TGGTACAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture CTCAACAGCA (4) 18.7 0.0187 P8 GC+SHH+1d culture TCAGCAATAA (2) 9.4 0.0094 P8 GC+SHH+1d culture GCTCCACAGG (4) 1.2 0.0012 3T3 fibroblasts CTCAACAGCA (4) 10.5 0.0105 3T3 fibroblasts GCTCCACAGG (4) 7 0.007 3T3 fibroblasts CACACTTTAC (3) 3.5 0.0035 3T3 fibroblasts TCAGCAATAA (2) 3.5 0.0035 E15 cortex CTCAACAGCA (4) 29.7 0.0297 E15 cortex GCCTCTCTCT (6) 4.9 0.0049 P1 cortex TCAGCAATAA (2) 9.1 0.0091 P1 cortex GCCTCTCTCT (6) 4.5 0.0045 Hypothalamus TCAGCAATAA (2) 3.6 0.0036 Hypothalamus CACACTTTAC (3) 1.8 0.0018 Hypothalamus CTCAACAGCA (4) 1.8 0.0018 E12.5 retina CTCAACAGCA (4) 22.5 0.0225 E12.5 retina TCAGCAATAA (2) 11.3 0.0113 E12.5 retina GCTCCACAGG (4) 3.8 0.0038 E14.5 retina CTCAACAGCA (4) 16.4 0.0164 E14.5 retina TCAGCAATAA (2) 16.4 0.0164 E14.5 retina TCCCTCCCTC (5) 3.6 0.0036 E16.5 retina CTCAACAGCA (4) 16.3 0.0163 E16.5 retina TCAGCAATAA (2) 5.4 0.0054 E16.5 retina GCCTCTCTCT (6) 3.6 0.0036 E16.5 retina CACACTTTAC (3) 1.8 0.0018 E18.5 retina TCAGCAATAA (2) 16.4 0.0164 E18.5 retina CTCAACAGCA (4) 9.1 0.0091 E18.5 retina GCCTCTCTCT (6) 3.6 0.0036 E18.5 retina CCTGTCATTT (4) 1.8 0.0018 E18.5 retina TGCTAAAAAA (5) 1.8 0.0018 P0.5 retina CTCAACAGCA (4) 25.5 0.0255 P0.5 retina GCTCCACAGG (4) 11.8 0.0118 P0.5 retina TCAGCAATAA (2) 5.9 0.0059 P0.5 retina GCCTCTCTCT (6) 2 0.002 P2.5 retina CTCAACAGCA (4) 15.8 0.0158 P2.5 retina TCAGCAATAA (2) 12.3 0.0123 P2.5 retina CCTGTCATTT (4) 1.8 0.0018 P2.5 retina GCCTCTCTCT (6) 1.8 0.0018 P2.5 retina GCTCCACAGG (4) 1.8 0.0018 P4.5 retina TCAGCAATAA (2) 19.8 0.0198 P4.5 retina CTCAACAGCA (4) 11.9 0.0119 P6.5 retina TCAGCAATAA (2) 11.7 0.0117 P6.5 retina CTCAACAGCA (4) 10 0.01 P6.5 retina CCTGTCATTT (4) 1.7 0.0017 P6.5 retina GCCTCTCTCT (6) 1.7 0.0017 P6.5 retina TGCTAAAAAA (5) 1.7 0.0017 P10.5 crx- retina CTCAACAGCA (4) 18.6 0.0186 P10.5 crx- retina TCAGCAATAA (2) 14.9 0.0149 P10.5 crx- retina GTCTGTACGT (2) 3.7 0.0037 P10.5 crx- retina CACACTTTAC (3) 1.9 0.0019 P10.5 crx- retina GCCTCTCTCT (6) 1.9 0.0019 P10.5 crx+ retina TCAGCAATAA (2) 13.5 0.0135 P10.5 crx+ retina CTCAACAGCA (4) 3.8 0.0038 P10.5 crx+ retina AATGCTGACA (6) 1.9 0.0019 P10.5 crx+ retina GCTCCACAGG (4) 1.9 0.0019 P10.5 crx+ retina TGCTAAAAAA (5) 1.9 0.0019 Adult retinal CTCAACAGCA (4) 20.4 0.0204 Adult retinal GCCTCTCTCT (6) 3.7 0.0037 Adult retinal TGGTACAAAA (4) 3.7 0.0037 Adult retinal AATGCTGACA (6) 1.9 0.0019 Adult retinal TCCCTCCCTC (5) 1.9 0.0019 ONL CTCAACAGCA (4) 9.6 0.0096 ONL TCAGCAATAA (2) 1.9 0.0019 ONL TGCTAAAAAA (5) 1.9 0.0019