Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.122725	D19Ertd409e	DNA segment, Chr 19, ERATO Doi 409, expressed	19	19 43.0 cM	52016
Mm.122725	Mgea5	meningioma expressed antigen 5 (hyaluronidase)	19		76055
Human Homolog	MGEA5[meningioma expressed antigen 5 (hyaluronidase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 157 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAGAGGCAC (2) 39.2 0.0392 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC GCTGGAATGA (6) 6.5 0.0065 P8 Cb GC GTGGCTCACG (9) 6.5 0.0065 P8 Cb GC GATGGAGATA (3) 3.3 0.0033 P8 Cb GC CACAAGTTTC (3) 1.6 0.0016 P8 Cb GC TTTATTTTAC (6) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma CAAGAGGCAC (2) 25.4 0.0254 Cb medulloblastoma AGCAAAAAAA (12) 23.1 0.0231 Cb medulloblastoma GTGGCTCACG (9) 11.6 0.0116 Cb medulloblastoma AGTGCTTTGT (7) 2.3 0.0023 Cb medulloblastoma GATGGAGATA (3) 2.3 0.0023 Cb medulloblastoma TTTATTTTAC (6) 2.3 0.0023 P8 GC+1d culture CAAGAGGCAC (2) 55.9 0.0559 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture GTGGCTCACG (9) 16 0.016 P8 GC+1d culture TTAAACTACC (3) 5.7 0.0057 P8 GC+1d culture GCTGGAATGA (6) 3.4 0.0034 P8 GC+1d culture TCCCAGGGTC (3) 3.4 0.0034 P8 GC+1d culture AGATGGATTC (2) 1.1 0.0011 P8 GC+1d culture AGCAAAAAAA (12) 1.1 0.0011 P8 GC+1d culture CACAAGTTTC (3) 1.1 0.0011 P8 GC+1d culture CTAATGATTA (3) 1.1 0.0011 P8 GC+1d culture TTTATTTTAC (6) 1.1 0.0011 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture CAAGAGGCAC (2) 43.3 0.0433 P8 GC+SHH+1d culture GTGGCTCACG (9) 11.7 0.0117 P8 GC+SHH+1d culture AGCAAAAAAA (12) 5.9 0.0059 P8 GC+SHH+1d culture GCTGGAATGA (6) 2.3 0.0023 P8 GC+SHH+1d culture TTTATTTTAC (6) 2.3 0.0023 P8 GC+SHH+1d culture AGATGGATTC (2) 1.2 0.0012 P8 GC+SHH+1d culture AGTGCTTTGT (7) 1.2 0.0012 P8 GC+SHH+1d culture CTAATGATTA (3) 1.2 0.0012 P8 GC+SHH+1d culture GATGGAGATA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCCCAGGGTC (3) 1.2 0.0012 P8 GC+SHH+1d culture TTAAACTACC (3) 1.2 0.0012 3T3 fibroblasts GTGGCTCACG (9) 17.5 0.0175 3T3 fibroblasts GCTGGAATGA (6) 14 0.014 3T3 fibroblasts CAAGAGGCAC (2) 7 0.007 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex CAAGAGGCAC (2) 29.7 0.0297 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex GTGGCTCACG (9) 24.7 0.0247 E15 cortex AGCAAAAAAA (12) 4.9 0.0049 E15 cortex GCTGGAATGA (6) 4.9 0.0049 E15 cortex TCCCAGGGTC (3) 4.9 0.0049 P1 cortex GCTGGAATGA (6) 13.6 0.0136 P1 cortex CAAGAGGCAC (2) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus CAAGAGGCAC (2) 18.1 0.0181 Hypothalamus GTGGCTCACG (9) 7.2 0.0072 Hypothalamus TTAAACTACC (3) 7.2 0.0072 Hypothalamus AGCAAAAAAA (12) 5.4 0.0054 Hypothalamus AGATGGATTC (2) 1.8 0.0018 Hypothalamus GCTGGAATGA (6) 1.8 0.0018 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina CAAGAGGCAC (2) 24.4 0.0244 E12.5 retina GTGGCTCACG (9) 7.5 0.0075 E12.5 retina GCTGGAATGA (6) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina CAAGAGGCAC (2) 20 0.02 E14.5 retina GTGGCTCACG (9) 9.1 0.0091 E14.5 retina AGCAAAAAAA (12) 1.8 0.0018 E14.5 retina TCCCAGGGTC (3) 1.8 0.0018 E14.5 retina TTAAACTACC (3) 1.8 0.0018 E14.5 retina TTTATTTTAC (6) 1.8 0.0018 E16.5 retina CAAGAGGCAC (2) 21.7 0.0217 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina GTGGCTCACG (9) 14.5 0.0145 E16.5 retina GCTGGAATGA (6) 7.2 0.0072 E16.5 retina TGATTATAGA (6) 5.4 0.0054 E16.5 retina TTTATTTTAC (6) 5.4 0.0054 E16.5 retina TCCCAGGGTC (3) 3.6 0.0036 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina CAAGAGGCAC (2) 36.4 0.0364 E18.5 retina GTGGCTCACG (9) 16.4 0.0164 E18.5 retina AGCAAAAAAA (12) 9.1 0.0091 E18.5 retina TTTATTTTAC (6) 7.3 0.0073 E18.5 retina ATGCCACATC (3) 1.8 0.0018 E18.5 retina GCTGGAATGA (6) 1.8 0.0018 E18.5 retina TGATTATAGA (6) 1.8 0.0018 E18.5 retina TTAAACTACC (3) 1.8 0.0018 P0.5 retina CAAGAGGCAC (2) 37.3 0.0373 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina GTGGCTCACG (9) 11.8 0.0118 P0.5 retina GCTGGAATGA (6) 9.8 0.0098 P0.5 retina TCCCAGGGTC (3) 2 0.002 P0.5 retina TTGGGCCAAA (5) 2 0.002 P0.5 retina TTTATTTTAC (6) 2 0.002 P2.5 retina CAAGAGGCAC (2) 61.6 0.0616 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina GTGGCTCACG (9) 12.3 0.0123 P2.5 retina AGCAAAAAAA (12) 8.8 0.0088 P2.5 retina GCTGGAATGA (6) 8.8 0.0088 P2.5 retina ATGCCACATC (3) 3.5 0.0035 P2.5 retina CTAATGATTA (3) 1.8 0.0018 P2.5 retina TTAAACTACC (3) 1.8 0.0018 P2.5 retina TTTATTTTAC (6) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina CAAGAGGCAC (2) 33.7 0.0337 P4.5 retina GTGGCTCACG (9) 7.9 0.0079 P4.5 retina AGCAAAAAAA (12) 5.9 0.0059 P4.5 retina ATGCCACATC (3) 4 0.004 P4.5 retina AAGAGGCAGA (7) 2 0.002 P4.5 retina GCTGGAATGA (6) 2 0.002 P4.5 retina TCCCAGGGTC (3) 2 0.002 P4.5 retina TTAAACTACC (3) 2 0.002 P4.5 retina TTGGGCCAAA (5) 2 0.002 P6.5 retina CAAGAGGCAC (2) 65 0.065 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GTGGCTCACG (9) 10 0.01 P6.5 retina AGCAAAAAAA (12) 6.7 0.0067 P6.5 retina ATGCCACATC (3) 6.7 0.0067 P6.5 retina CTAATGATTA (3) 3.3 0.0033 P6.5 retina TTTATTTTAC (6) 3.3 0.0033 P6.5 retina CAAAAGGCCC (6) 1.7 0.0017 P6.5 retina GCTGGAATGA (6) 1.7 0.0017 P10.5 crx- retina CAAGAGGCAC (2) 18.6 0.0186 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina GCTGGAATGA (6) 5.6 0.0056 P10.5 crx- retina GTGGCTCACG (9) 5.6 0.0056 P10.5 crx- retina TCCCAGGGTC (3) 5.6 0.0056 P10.5 crx- retina TTAAACTACC (3) 5.6 0.0056 P10.5 crx- retina AGATGGATTC (2) 1.9 0.0019 P10.5 crx- retina GATGGAGATA (3) 1.9 0.0019 P10.5 crx- retina TTGGGCCAAA (5) 1.9 0.0019 P10.5 crx- retina TTTATTTTAC (6) 1.9 0.0019 P10.5 crx+ retina CAAGAGGCAC (2) 38.4 0.0384 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina GTGGCTCACG (9) 11.5 0.0115 P10.5 crx+ retina AGCAAAAAAA (12) 7.7 0.0077 P10.5 crx+ retina GCTGGAATGA (6) 7.7 0.0077 P10.5 crx+ retina ATGCCACATC (3) 1.9 0.0019 P10.5 crx+ retina CAAAAGGCCC (6) 1.9 0.0019 P10.5 crx+ retina CACAAGTTTC (3) 1.9 0.0019 P10.5 crx+ retina CTAATGATTA (3) 1.9 0.0019 P10.5 crx+ retina TTAAACTACC (3) 1.9 0.0019 P10.5 crx+ retina TTGGGCCAAA (5) 1.9 0.0019 Adult retinal CAAGAGGCAC (2) 18.5 0.0185 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal GTGGCTCACG (9) 9.3 0.0093 Adult retinal GCTGGAATGA (6) 7.4 0.0074 Adult retinal TCCCAGGGTC (3) 5.6 0.0056 Adult retinal AGTGCTTTGT (7) 1.9 0.0019 Adult retinal CAAAAGGCCC (6) 1.9 0.0019 Adult retinal TTGGGCCAAA (5) 1.9 0.0019 Adult retinal TTTATTTTAC (6) 1.9 0.0019 ONL GTGGCTCACG (9) 24.9 0.0249 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL CAAGAGGCAC (2) 7.7 0.0077 ONL AAGAGGCAGA (7) 3.8 0.0038 ONL TTTATTTTAC (6) 3.8 0.0038 ONL AGATGGATTC (2) 1.9 0.0019 ONL AGCAAAAAAA (12) 1.9 0.0019 ONL GCTGGAATGA (6) 1.9 0.0019