Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1276	Sag	retinal S-antigen	1	1 D (1 53.6 cM)	20215
Gene Ontology	calcium ion binding | sensory perception | signal transduction | vision
Human Homolog	SAG[S-antigen; retina and pineal gland (arrestin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 10 In Situ Hybridization Images

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SAGE Tags

Total 112 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGGCTCACA (25) 11.4 0.0114 P8 Cb GC AAAAAAAAAC (24) 4.9 0.0049 P8 Cb GC GGCGGGAAGG (4) 1.6 0.0016 Cb medulloblastoma ATGGCTCACA (25) 20.8 0.0208 Cb medulloblastoma AAAAAAAAAC (24) 4.6 0.0046 Cb medulloblastoma CCCCCCACCC (9) 4.6 0.0046 Cb medulloblastoma GCTTGCTCAG (14) 2.3 0.0023 P8 GC+1d culture ATGGCTCACA (25) 33.1 0.0331 P8 GC+1d culture CAAGGGGCAG (6) 5.7 0.0057 P8 GC+1d culture AAAAAAAAAC (24) 1.1 0.0011 P8 GC+1d culture AGGACACAAA (5) 1.1 0.0011 P8 GC+1d culture GCCTGGAGAA (5) 1.1 0.0011 P8 GC+1d culture GGCGGGAAGG (4) 1.1 0.0011 P8 GC+SHH+1d culture ATGGCTCACA (25) 25.8 0.0258 P8 GC+SHH+1d culture AAAAAAAAAC (24) 3.5 0.0035 P8 GC+SHH+1d culture CAAGGGGCAG (6) 3.5 0.0035 P8 GC+SHH+1d culture GGGATCCTGG (5) 1.2 0.0012 3T3 fibroblasts ATGGCTCACA (25) 31.5 0.0315 3T3 fibroblasts CAAGGGGCAG (6) 3.5 0.0035 3T3 fibroblasts GCCTGGAGAA (5) 3.5 0.0035 E15 cortex ATGGCTCACA (25) 29.7 0.0297 E15 cortex AAAAAAAAAC (24) 4.9 0.0049 E15 cortex GCCTGGAGAA (5) 4.9 0.0049 E15 cortex GCTTGCTCAG (14) 4.9 0.0049 P1 cortex ATGGCTCACA (25) 13.6 0.0136 P1 cortex AAAAAAAAAC (24) 9.1 0.0091 Hypothalamus ATGGCTCACA (25) 43.5 0.0435 Hypothalamus CAAGGGGCAG (6) 7.2 0.0072 Hypothalamus AAAAAAAAAC (24) 1.8 0.0018 Hypothalamus AGCATTCCTC 1.8 0.0018 Hypothalamus GGAGGCCTCC (6) 1.8 0.0018 Hypothalamus GGGAGCCCAT (3) 1.8 0.0018 E12.5 retina ATGGCTCACA (25) 48.8 0.0488 E12.5 retina GCTTGCTCAG (14) 1.9 0.0019 E14.5 retina ATGGCTCACA (25) 47.4 0.0474 E14.5 retina GCTTGCTCAG (14) 3.6 0.0036 E14.5 retina AAAAAAAAAC (24) 1.8 0.0018 E14.5 retina GCCTGGAGAA (5) 1.8 0.0018 E14.5 retina GGGGGGCTGG (8) 1.8 0.0018 E16.5 retina ATGGCTCACA (25) 58 0.058 E16.5 retina AGCATTCCTC 5.4 0.0054 E16.5 retina AAAAAAAAAC (24) 1.8 0.0018 E16.5 retina CCCCCCACCC (9) 1.8 0.0018 E18.5 retina ATGGCTCACA (25) 38.2 0.0382 E18.5 retina AAAAAAAAAC (24) 3.6 0.0036 E18.5 retina AGCATTCCTC 3.6 0.0036 E18.5 retina GGGAGCCCAT (3) 1.8 0.0018 E18.5 retina GGGGGGCTGG (8) 1.8 0.0018 P0.5 retina ATGGCTCACA (25) 35.3 0.0353 P0.5 retina AGCATTCCTC 13.7 0.0137 P0.5 retina CAAGGGGCAG (6) 2 0.002 P0.5 retina CCCCCCACCC (9) 2 0.002 P0.5 retina GGGGGGCTGG (8) 2 0.002 P2.5 retina ATGGCTCACA (25) 31.7 0.0317 P2.5 retina AGCATTCCTC 26.4 0.0264 P2.5 retina AAAAAAAAAC (24) 5.3 0.0053 P2.5 retina CAAGGGGCAG (6) 1.8 0.0018 P2.5 retina CCCCCCACCC (9) 1.8 0.0018 P2.5 retina GCCTGGAGAA (5) 1.8 0.0018 P4.5 retina AGCATTCCTC 81.2 0.0812 P4.5 retina ATGGCTCACA (25) 23.8 0.0238 P4.5 retina GGAGGCCTCC (6) 4 0.004 P4.5 retina AAAAAAAAAC (24) 2 0.002 P4.5 retina CAAGGGGCAG (6) 2 0.002 P6.5 retina AGCATTCCTC 276.8 0.2768 P6.5 retina ATGGCTCACA (25) 55 0.055 P6.5 retina CACCCGCAGC (2) 10 0.01 P6.5 retina AAAAAAAAAC (24) 5 0.005 P6.5 retina GCCTGGAGAA (5) 1.7 0.0017 P6.5 retina GGGAGCCCAT (3) 1.7 0.0017 P6.5 retina GTGTGTGCCT (2) 1.7 0.0017 P10.5 crx- retina AGCATTCCTC 211.8 0.2118 P10.5 crx- retina ATGGCTCACA (25) 44.6 0.0446 P10.5 crx- retina CACCCGCAGC (2) 11.1 0.0111 P10.5 crx- retina GCAGCCTGCG (2) 5.6 0.0056 P10.5 crx- retina GGGATCCTGG (5) 5.6 0.0056 P10.5 crx- retina AAAAAAAAAC (24) 1.9 0.0019 P10.5 crx- retina AGGACACAAA (5) 1.9 0.0019 P10.5 crx- retina GCTTGCTCAG (14) 1.9 0.0019 P10.5 crx- retina GGGAGCCCAT (3) 1.9 0.0019 P10.5 crx+ retina AGCATTCCTC 1143.9 1.1439 P10.5 crx+ retina ATGGCTCACA (25) 44.2 0.0442 P10.5 crx+ retina CACCCGCAGC (2) 40.4 0.0404 P10.5 crx+ retina GGGAGCCCAT (3) 5.8 0.0058 P10.5 crx+ retina AGAACCGCTG 3.8 0.0038 P10.5 crx+ retina GTGTGTGCCT (2) 3.8 0.0038 P10.5 crx+ retina AGCATTCCTT (2) 1.9 0.0019 P10.5 crx+ retina CAAGGGGCAG (6) 1.9 0.0019 P10.5 crx+ retina GCAGCCTGCG (2) 1.9 0.0019 P10.5 crx+ retina GGCGGGAAGG (4) 1.9 0.0019 P10.5 crx+ retina GGGATCCTGG (5) 1.9 0.0019 Adult retinal AGCATTCCTC 633.2 0.6332 Adult retinal ATGGCTCACA (25) 33.3 0.0333 Adult retinal CACCCGCAGC (2) 16.7 0.0167 Adult retinal GTGTGTGCCT (2) 16.7 0.0167 Adult retinal AGAACCGCTG 13 0.013 Adult retinal GGGAGCCCAT (3) 9.3 0.0093 Adult retinal AGCATTCCTT (2) 5.6 0.0056 Adult retinal CAAGGGGCAG (6) 1.9 0.0019 Adult retinal GCAGCCTGCG (2) 1.9 0.0019 Adult retinal GCTTGCTCAG (14) 1.9 0.0019 Adult retinal GGGATCCTGG (5) 1.9 0.0019 ONL AGCATTCCTC 724 0.724 ONL ATGGCTCACA (25) 49.8 0.0498 ONL CACCCGCAGC (2) 23 0.023 ONL GGGATCCTGG (5) 7.7 0.0077 ONL GTGTGTGCCT (2) 3.8 0.0038 ONL AGCATTCCTT (2) 1.9 0.0019 ONL AGGACACAAA (5) 1.9 0.0019 ONL GCTTGCTCAG (14) 1.9 0.0019 ONL GGGAGCCCAT (3) 1.9 0.0019 ONL GGGGGGCTGG (8) 1.9 0.0019