Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.12871	Dcx	doublecortin	X		13193
Gene Ontology	central nervous system development | cytoskeleton | intracellular signaling cascade | microtubule associated complex | microtubule binding | neurogenesis | protein binding
Human Homolog	DCX[doublecortex; lissencephaly, X-linked (doublecortin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 62 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGTGTGAGGT (6) 13.1 0.0131 P8 Cb GC AGAGACCACA (3) 3.3 0.0033 P8 Cb GC AAATTATATG (4) 1.6 0.0016 P8 Cb GC GTGGAAGGAG (14) 1.6 0.0016 P8 Cb GC TTTTGGCCAA (5) 1.6 0.0016 Cb medulloblastoma TTTTGGCCAA (5) 4.6 0.0046 Cb medulloblastoma ACATTATTTT (5) 2.3 0.0023 P8 GC+1d culture TGTGTGAGGT (6) 35.4 0.0354 P8 GC+1d culture AGAGACCACA (3) 4.6 0.0046 P8 GC+1d culture TTATTGTACA (2) 3.4 0.0034 P8 GC+1d culture AAATTATATG (4) 1.1 0.0011 P8 GC+1d culture GTCAGCAAGC (2) 1.1 0.0011 P8 GC+1d culture TGCAGTAAAT (8) 1.1 0.0011 P8 GC+SHH+1d culture TGTGTGAGGT (6) 31.6 0.0316 P8 GC+SHH+1d culture TTATTGTACA (2) 3.5 0.0035 P8 GC+SHH+1d culture AAATTATATG (4) 1.2 0.0012 P8 GC+SHH+1d culture TGCAGTAAAT (8) 1.2 0.0012 E15 cortex TGTGTGAGGT (6) 29.7 0.0297 E15 cortex AGAGACCACA (3) 9.9 0.0099 E15 cortex GTCAGCAAGC (2) 9.9 0.0099 P1 cortex AGAGACCACA (3) 50 0.05 P1 cortex TGTGTGAGGT (6) 13.6 0.0136 P1 cortex GTCAGCAAGC (2) 4.5 0.0045 P1 cortex GTGGAAGGAG (14) 4.5 0.0045 Hypothalamus GTGGAAGGAG (14) 3.6 0.0036 Hypothalamus TGCAGTAAAT (8) 1.8 0.0018 Hypothalamus TGTGTGAGGT (6) 1.8 0.0018 E12.5 retina TGTGTGAGGT (6) 3.8 0.0038 E12.5 retina AAATTATATG (4) 1.9 0.0019 E14.5 retina GTGGAAGGAG (14) 5.5 0.0055 E14.5 retina GTCAGCAAGC (2) 1.8 0.0018 E14.5 retina TGTGTGAGGT (6) 1.8 0.0018 E14.5 retina TTTTGGCCAA (5) 1.8 0.0018 E16.5 retina TGTGTGAGGT (6) 10.9 0.0109 E16.5 retina AAATTATATG (4) 1.8 0.0018 E16.5 retina ACATTATTTT (5) 1.8 0.0018 E16.5 retina GTGGAAGGAG (14) 1.8 0.0018 E16.5 retina TGCAGTAAAT (8) 1.8 0.0018 E18.5 retina AAATTATATG (4) 5.5 0.0055 E18.5 retina TGTGTGAGGT (6) 5.5 0.0055 E18.5 retina TTTTGGCCAA (5) 1.8 0.0018 P0.5 retina TGTGTGAGGT (6) 9.8 0.0098 P0.5 retina TTTTGGCCAA (5) 2 0.002 P2.5 retina TGCAGTAAAT (8) 3.5 0.0035 P2.5 retina TGTGTGAGGT (6) 1.8 0.0018 P4.5 retina TGTGTGAGGT (6) 5.9 0.0059 P6.5 retina TGTGTGAGGT (6) 5 0.005 P6.5 retina AAATTATATG (4) 1.7 0.0017 P6.5 retina TTATTGTACA (2) 1.7 0.0017 P6.5 retina TTTTGGCCAA (5) 1.7 0.0017 P10.5 crx- retina AAATTATATG (4) 5.6 0.0056 P10.5 crx- retina TGTGTGAGGT (6) 1.9 0.0019 P10.5 crx+ retina ACATTATTTT (5) 3.8 0.0038 P10.5 crx+ retina TTATTGTACA (2) 1.9 0.0019 Adult retinal AAATTATATG (4) 1.9 0.0019 Adult retinal ACATTATTTT (5) 1.9 0.0019 Adult retinal GTGGAAGGAG (14) 1.9 0.0019 Adult retinal TGTGTGAGGT (6) 1.9 0.0019 ONL AAATTATATG (4) 1.9 0.0019 ONL ACATTATTTT (5) 1.9 0.0019 ONL GTGGAAGGAG (14) 1.9 0.0019 ONL TTTTGGCCAA (5) 1.9 0.0019