Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1372	Pde6b	phosphodiesterase 6B, cGMP, rod receptor, beta polypeptide	5	5 57.0 cM	18587
Gene Ontology	3',5'-cyclic-nucleotide phosphodiesterase activity | catalytic activity | hydrolase activity | membrane | perception of light | receptor activity | signal transduction | vision
Human Homolog	PDE6B[phosphodiesterase 6B, cGMP-specific, rod, beta (congenital stationary night blindness 3, autosomal dominant)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAACATTGCA (5) 6.5 0.0065 P8 Cb GC AAGATGTTTC (4) 1.6 0.0016 P8 Cb GC GACCCAAGGA (8) 1.6 0.0016 Cb medulloblastoma GAACATTGCA (5) 6.9 0.0069 Cb medulloblastoma ACAGGGAAAA (3) 2.3 0.0023 Cb medulloblastoma TGAGATGTGA (2) 2.3 0.0023 P8 GC+1d culture GAACATTGCA (5) 10.3 0.0103 P8 GC+SHH+1d culture GAACATTGCA (5) 2.3 0.0023 P8 GC+SHH+1d culture ACAGGGAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GACCCAAGGA (8) 1.2 0.0012 3T3 fibroblasts GAACATTGCA (5) 217.3 0.2173 3T3 fibroblasts AAGATGTTTC (4) 3.5 0.0035 P1 cortex GAACATTGCA (5) 18.2 0.0182 Hypothalamus GAACATTGCA (5) 14.5 0.0145 Hypothalamus ACAGTGTTGG (4) 3.6 0.0036 Hypothalamus GACCCAAGGA (8) 1.8 0.0018 Hypothalamus TTGAGGATGT (2) 1.8 0.0018 E12.5 retina GAACATTGCA (5) 3.8 0.0038 E14.5 retina GAACATTGCA (5) 3.6 0.0036 E14.5 retina ACAGGGAAAA (3) 1.8 0.0018 E14.5 retina CTCCACCACC (3) 1.8 0.0018 E14.5 retina TGAGATGTGA (2) 1.8 0.0018 E16.5 retina ACAGTGTTGG (4) 3.6 0.0036 E16.5 retina ACAGGGAAAA (3) 1.8 0.0018 E16.5 retina GAACATTGCA (5) 1.8 0.0018 E18.5 retina ACAGTGTTGG (4) 1.8 0.0018 P0.5 retina GAACATTGCA (5) 3.9 0.0039 P2.5 retina AAACACGGCT 1.8 0.0018 P2.5 retina ACAGGGAAAA (3) 1.8 0.0018 P2.5 retina GAACATTGCA (5) 1.8 0.0018 P2.5 retina TTGAGGATGT (2) 1.8 0.0018 P4.5 retina GCTTTGGGTC 15.9 0.0159 P4.5 retina GAACATTGCA (5) 5.9 0.0059 P4.5 retina AGCAGCTCCT (3) 2 0.002 P4.5 retina GACCCAAGGA (8) 2 0.002 P6.5 retina GCTTTGGGTC 45 0.045 P6.5 retina GAACATTGCA (5) 11.7 0.0117 P6.5 retina CTCCACCACC (3) 3.3 0.0033 P6.5 retina AAACACGGCT 1.7 0.0017 P6.5 retina AGCAGCTCCT (3) 1.7 0.0017 P6.5 retina TTTGACCGAC 1.7 0.0017 P10.5 crx- retina GCTTTGGGTC 57.6 0.0576 P10.5 crx- retina GAACATTGCA (5) 7.4 0.0074 P10.5 crx- retina TTTGACCGAC 7.4 0.0074 P10.5 crx- retina AGCAGCTCCT (3) 1.9 0.0019 P10.5 crx+ retina GCTTTGGGTC 123 0.123 P10.5 crx+ retina AGCAGCTCCT (3) 17.3 0.0173 P10.5 crx+ retina GAACATTGCA (5) 5.8 0.0058 P10.5 crx+ retina TTTGACCGAC 3.8 0.0038 P10.5 crx+ retina AAGATGTTTC (4) 1.9 0.0019 Adult retinal GCTTTGGGTC 187 0.187 Adult retinal AGCAGCTCCT (3) 9.3 0.0093 Adult retinal GAACATTGCA (5) 5.6 0.0056 Adult retinal TGAGATGTGA (2) 1.9 0.0019 ONL GCTTTGGGTC 170.5 0.1705 ONL AGCAGCTCCT (3) 17.2 0.0172 ONL TTTGACCGAC 5.7 0.0057 ONL AAACACGGCT 3.8 0.0038 ONL AAGATGTTTC (4) 1.9 0.0019 ONL GAACATTGCA (5) 1.9 0.0019