Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.138512
BC024806
cDNA sequence BC024806
9
235169
Human Homolog
H17[hypothetical protein H17]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AATAAAAAAA (
9
)
1.6
0.0016
P8 Cb GC
ATAATAAAAG (
3
)
1.6
0.0016
P8 Cb GC
GGGGCTCACA (
10
)
1.6
0.0016
P8 Cb GC
GTGGCTCCCA (
14
)
1.6
0.0016
Cb medulloblastoma
AATAAAAAAA (
9
)
6.9
0.0069
Cb medulloblastoma
GTGGCTCCCA (
14
)
2.3
0.0023
Cb medulloblastoma
TCAGGATCCA (
2
)
2.3
0.0023
P8 GC+1d culture
GTGGCTCCCA (
14
)
3.4
0.0034
P8 GC+1d culture
GGGGCTCACA (
10
)
2.3
0.0023
P8 GC+1d culture
AATAAAAAAA (
9
)
1.1
0.0011
P8 GC+SHH+1d culture
AATAAAAAAA (
9
)
2.3
0.0023
P8 GC+SHH+1d culture
GTGGCTCCCA (
14
)
2.3
0.0023
P8 GC+SHH+1d culture
TGAAAATGGA
(
3
)
1.2
0.0012
3T3 fibroblasts
TCAGGATCCA (
2
)
7
0.007
3T3 fibroblasts
AATAAAAAAA (
9
)
3.5
0.0035
E15 cortex
GGGGCTCACA (
10
)
54.4
0.0544
E15 cortex
AATAAAAAAA (
9
)
4.9
0.0049
E15 cortex
GTGGCTCCCA (
14
)
4.9
0.0049
P1 cortex
GTGGCTCCCA (
14
)
18.2
0.0182
P1 cortex
GGGGCTCACA (
10
)
13.6
0.0136
Hypothalamus
GGGGCTCACA (
10
)
36.2
0.0362
Hypothalamus
GTGGCTCCCA (
14
)
10.9
0.0109
Hypothalamus
AATAAAAAAA (
9
)
5.4
0.0054
Hypothalamus
TCAGGATCCA (
2
)
3.6
0.0036
E12.5 retina
GGGGCTCACA (
10
)
35.7
0.0357
E12.5 retina
GTGGCTCCCA (
14
)
16.9
0.0169
E12.5 retina
AATAAAAAAA (
9
)
3.8
0.0038
E14.5 retina
GGGGCTCACA (
10
)
54.7
0.0547
E14.5 retina
GTGGCTCCCA (
14
)
16.4
0.0164
E14.5 retina
AATAAAAAAA (
9
)
1.8
0.0018
E16.5 retina
GGGGCTCACA (
10
)
36.2
0.0362
E16.5 retina
GTGGCTCCCA (
14
)
9.1
0.0091
E18.5 retina
GGGGCTCACA (
10
)
72.8
0.0728
E18.5 retina
GTGGCTCCCA (
14
)
20
0.02
E18.5 retina
AATAAAAAAA (
9
)
1.8
0.0018
P0.5 retina
GGGGCTCACA (
10
)
37.3
0.0373
P0.5 retina
GTGGCTCCCA (
14
)
9.8
0.0098
P2.5 retina
GGGGCTCACA (
10
)
65.1
0.0651
P2.5 retina
GTGGCTCCCA (
14
)
26.4
0.0264
P2.5 retina
ATAATAAAAG (
3
)
3.5
0.0035
P4.5 retina
GGGGCTCACA (
10
)
27.7
0.0277
P4.5 retina
GTGGCTCCCA (
14
)
9.9
0.0099
P4.5 retina
AATAAAAAAA (
9
)
4
0.004
P4.5 retina
TGAAAATGGA
(
3
)
2
0.002
P6.5 retina
GGGGCTCACA (
10
)
43.4
0.0434
P6.5 retina
GTGGCTCCCA (
14
)
15
0.015
P6.5 retina
AATAAAAAAA (
9
)
3.3
0.0033
P6.5 retina
ATAATAAAAG (
3
)
1.7
0.0017
P10.5 crx- retina
GGGGCTCACA (
10
)
24.2
0.0242
P10.5 crx- retina
GTGGCTCCCA (
14
)
14.9
0.0149
P10.5 crx+ retina
GGGGCTCACA (
10
)
17.3
0.0173
P10.5 crx+ retina
GTGGCTCCCA (
14
)
11.5
0.0115
P10.5 crx+ retina
TCAGGATCCA (
2
)
1.9
0.0019
P10.5 crx+ retina
TGAAAATGGA
(
3
)
1.9
0.0019
Adult retinal
GGGGCTCACA (
10
)
31.5
0.0315
Adult retinal
GTGGCTCCCA (
14
)
14.8
0.0148
Adult retinal
AATAAAAAAA (
9
)
1.9
0.0019
ONL
GGGGCTCACA (
10
)
38.3
0.0383
ONL
GTGGCTCCCA (
14
)
28.7
0.0287
ONL
TGAAAATGGA
(
3
)
1.9
0.0019
