Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.138740	Clasp1	CLIP associating protein 1	1		76707
Gene Ontology	cytoplasmic microtubule | microtubule binding | microtubule stabilization | protein binding
Human Homolog	CLASP1[cytoplasmic linker associated protein 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 98 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC GCAAATGTAC 11.4 0.0114 P8 Cb GC GTGGCTCCCA (14) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma GCAAATGTAC 4.6 0.0046 Cb medulloblastoma GTGGCTCCCA (14) 2.3 0.0023 Cb medulloblastoma TGCAGCCTGG (5) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GCAAATGTAC 3.4 0.0034 P8 GC+1d culture GTGGCTCCCA (14) 3.4 0.0034 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TGCAGCCTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture GCAAATGTAC 9.4 0.0094 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture CCCAAAAAAA (19) 3.5 0.0035 P8 GC+SHH+1d culture GTGGCTCCCA (14) 2.3 0.0023 P8 GC+SHH+1d culture GACATCCTGT (2) 1.2 0.0012 P8 GC+SHH+1d culture TGTGCAGGTA (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts GACATCCTGT (2) 3.5 0.0035 3T3 fibroblasts GAGCTGAAGC (6) 3.5 0.0035 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GAGCTGAAGC (6) 9.9 0.0099 E15 cortex GCAAATGTAC 9.9 0.0099 E15 cortex CCCAAAAAAA (19) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex GTGGCTCCCA (14) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex GTGGCTCCCA (14) 18.2 0.0182 P1 cortex GCAAATGTAC 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus GTGGCTCCCA (14) 10.9 0.0109 Hypothalamus GCAAATGTAC 5.4 0.0054 Hypothalamus GACATCCTGT (2) 3.6 0.0036 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina GTGGCTCCCA (14) 16.9 0.0169 E12.5 retina GCAAATGTAC 9.4 0.0094 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina GTGGCTCCCA (14) 16.4 0.0164 E14.5 retina GCAAATGTAC 5.5 0.0055 E14.5 retina TGTGCAGGTA (2) 3.6 0.0036 E14.5 retina GACATCCTGT (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina GTGGCTCCCA (14) 9.1 0.0091 E16.5 retina GCAAATGTAC 7.2 0.0072 E16.5 retina CCCAAAAAAA (19) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina GTGGCTCCCA (14) 20 0.02 E18.5 retina GCAAATGTAC 18.2 0.0182 E18.5 retina CCCAAAAAAA (19) 3.6 0.0036 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GTGGCTCCCA (14) 9.8 0.0098 P0.5 retina GCAAATGTAC 5.9 0.0059 P0.5 retina CTGACCTTCT (3) 3.9 0.0039 P0.5 retina CCCAAAAAAA (19) 2 0.002 P0.5 retina GACATCCTGT (2) 2 0.002 P0.5 retina GAGCTGAAGC (6) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina GTGGCTCCCA (14) 26.4 0.0264 P2.5 retina GCAAATGTAC 12.3 0.0123 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina CCCAAAAAAA (19) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina GCAAATGTAC 15.9 0.0159 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina GTGGCTCCCA (14) 9.9 0.0099 P4.5 retina CCCAAAAAAA (19) 2 0.002 P4.5 retina GACATCCTGT (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina GCAAATGTAC 15 0.015 P6.5 retina GTGGCTCCCA (14) 15 0.015 P6.5 retina CCCAAAAAAA (19) 3.3 0.0033 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina GACATCCTGT (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina GTGGCTCCCA (14) 14.9 0.0149 P10.5 crx- retina GCAAATGTAC 5.6 0.0056 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina GCAAATGTAC 19.2 0.0192 P10.5 crx+ retina GTGGCTCCCA (14) 11.5 0.0115 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal GTGGCTCCCA (14) 14.8 0.0148 Adult retinal GACATCCTGT (2) 7.4 0.0074 Adult retinal GCAAATGTAC 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal CCCAAAAAAA (19) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GTGGCTCCCA (14) 28.7 0.0287 ONL GCAAATGTAC 7.7 0.0077 ONL CCCAAAAAAA (19) 1.9 0.0019 ONL CTGACCTTCT (3) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TGTGCAGGTA (2) 1.9 0.0019