Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.139926	D9Ertd292e	DNA segment, Chr 9, ERATO Doi 292, expressed	9	9 56.0 cM	52208
Mm.139926	4930506F14Rik	RIKEN cDNA 4930506F14 gene	9		75102
Mm.139926	Rbm6	RNA binding motif protein 6	9		19654
Gene Ontology	nucleus
Human Homolog	RBM6[RNA binding motif protein 6]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 92 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAATAAA (9) 32.6 0.0326 P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC TTTGCTCGAT (3) 9.8 0.0098 P8 Cb GC TGGAAAAAAA (27) 3.3 0.0033 P8 Cb GC GAACTGGAGT (6) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma CAAAAATAAA (9) 69.4 0.0694 Cb medulloblastoma TGGAAAAAAA (27) 25.4 0.0254 P8 GC+1d culture CAAAAATAAA (9) 34.2 0.0342 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+1d culture TTTGCTCGAT (3) 5.7 0.0057 P8 GC+1d culture TGGAAAAAAA (27) 2.3 0.0023 P8 GC+1d culture TTAAAAACAA (8) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAATAAA (9) 65.6 0.0656 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture TGGAAAAAAA (27) 11.7 0.0117 P8 GC+SHH+1d culture TTAAAAACAA (8) 3.5 0.0035 P8 GC+SHH+1d culture TTTGCTCGAT (3) 2.3 0.0023 P8 GC+SHH+1d culture AAAGAAACAT (4) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 3T3 fibroblasts CAAAAATAAA (9) 3.5 0.0035 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 E15 cortex CAAAAATAAA (9) 4.9 0.0049 E15 cortex TGGAAAAAAA (27) 4.9 0.0049 P1 cortex CAAAAATAAA (9) 36.4 0.0364 P1 cortex AAAGAAACAT (4) 4.5 0.0045 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 P1 cortex TTTGCTCGAT (3) 4.5 0.0045 Hypothalamus CAAAAATAAA (9) 67 0.067 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus AAAGAAACAT (4) 1.8 0.0018 Hypothalamus ACTCTTCGAA (3) 1.8 0.0018 Hypothalamus TGGAAAAAAA (27) 1.8 0.0018 Hypothalamus TTAAAAACAA (8) 1.8 0.0018 E12.5 retina CAAAAATAAA (9) 223.4 0.2234 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina TGGAAAAAAA (27) 5.6 0.0056 E12.5 retina TTTGCTCGAT (3) 5.6 0.0056 E14.5 retina CAAAAATAAA (9) 153 0.153 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina TGGAAAAAAA (27) 10.9 0.0109 E14.5 retina ACTCTTCGAA (3) 3.6 0.0036 E14.5 retina TTTGCTCGAT (3) 3.6 0.0036 E16.5 retina CAAAAATAAA (9) 199.2 0.1992 E16.5 retina TTTGCTCGAT (3) 19.9 0.0199 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E16.5 retina TGGAAAAAAA (27) 3.6 0.0036 E16.5 retina ACTCTTCGAA (3) 1.8 0.0018 E16.5 retina GAACTGGAGT (6) 1.8 0.0018 E16.5 retina TTAAAAACAA (8) 1.8 0.0018 E18.5 retina CAAAAATAAA (9) 391.1 0.3911 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 E18.5 retina TGGAAAAAAA (27) 18.2 0.0182 E18.5 retina TTTGCTCGAT (3) 5.5 0.0055 P0.5 retina CAAAAATAAA (9) 62.8 0.0628 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P0.5 retina TGGAAAAAAA (27) 11.8 0.0118 P0.5 retina TTTGCTCGAT (3) 3.9 0.0039 P0.5 retina GAACTGGAGT (6) 2 0.002 P2.5 retina CAAAAATAAA (9) 253.4 0.2534 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina TGGAAAAAAA (27) 10.6 0.0106 P2.5 retina TTTGCTCGAT (3) 7 0.007 P2.5 retina TTAAAAACAA (8) 1.8 0.0018 P4.5 retina CAAAAATAAA (9) 281.4 0.2814 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TTTGCTCGAT (3) 5.9 0.0059 P4.5 retina TGGAAAAAAA (27) 2 0.002 P4.5 retina TTAAAAACAA (8) 2 0.002 P6.5 retina CAAAAATAAA (9) 161.7 0.1617 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina TTTGCTCGAT (3) 10 0.01 P6.5 retina TGGAAAAAAA (27) 5 0.005 P10.5 crx- retina CAAAAATAAA (9) 96.6 0.0966 P10.5 crx- retina TTTGCTCGAT (3) 13 0.013 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina TGGAAAAAAA (27) 3.7 0.0037 P10.5 crx+ retina CAAAAATAAA (9) 126.9 0.1269 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina TGGAAAAAAA (27) 5.8 0.0058 P10.5 crx+ retina TTAAAAACAA (8) 1.9 0.0019 P10.5 crx+ retina TTTGCTCGAT (3) 1.9 0.0019 Adult retinal CAAAAATAAA (9) 81.5 0.0815 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal TTTGCTCGAT (3) 5.6 0.0056 Adult retinal TGGAAAAAAA (27) 3.7 0.0037 Adult retinal ACTCTTCGAA (3) 1.9 0.0019 Adult retinal TTAAAAACAA (8) 1.9 0.0019 ONL CAAAAATAAA (9) 105.3 0.1053 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL GAACTGGAGT (6) 3.8 0.0038 ONL TTAAAAACAA (8) 1.9 0.0019