Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.14599
Smr1
submaxillary gland androgen regulated protein 1
5
20599
Mm.14599
Smr3
submaxillary gland androgen regulated protein 3
5
20601
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 5 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 73 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACAAAATAAA (
12
)
3.3
0.0033
P8 Cb GC
AAAAATTAAA (
5
)
1.6
0.0016
P8 Cb GC
AAAATAAAGA
(
4
)
1.6
0.0016
P8 Cb GC
CACCACCACT (
20
)
1.6
0.0016
P8 Cb GC
GAAAAAAATA (
16
)
1.6
0.0016
P8 Cb GC
TCCACCAGTT (
2
)
1.6
0.0016
Cb medulloblastoma
ACAAAATAAA (
12
)
25.4
0.0254
Cb medulloblastoma
AAAAATTAAA (
5
)
2.3
0.0023
Cb medulloblastoma
TCCACCAGTT (
2
)
2.3
0.0023
P8 GC+1d culture
ACAAAATAAA (
12
)
8
0.008
P8 GC+1d culture
CACCACCACT (
20
)
5.7
0.0057
P8 GC+1d culture
AAAAATAAAG (
7
)
1.1
0.0011
P8 GC+1d culture
AAAATAAAGA
(
4
)
1.1
0.0011
P8 GC+1d culture
CAAAATGAAA (
3
)
1.1
0.0011
P8 GC+1d culture
CATATCTGTT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ACAAAATAAA (
12
)
10.5
0.0105
P8 GC+SHH+1d culture
AAAATAAAGA
(
4
)
1.2
0.0012
P8 GC+SHH+1d culture
CAAAATGAAA (
3
)
1.2
0.0012
P8 GC+SHH+1d culture
CACCACCACT (
20
)
1.2
0.0012
P8 GC+SHH+1d culture
CATATCTGTT
(
2
)
1.2
0.0012
3T3 fibroblasts
TCCACCAGTT (
2
)
3.5
0.0035
E15 cortex
AGAATCAAAA (
4
)
4.9
0.0049
E15 cortex
TCCACCAGTT (
2
)
4.9
0.0049
P1 cortex
ACAAAATAAA (
12
)
4.5
0.0045
P1 cortex
CACCACCACT (
20
)
4.5
0.0045
Hypothalamus
ACAAAATAAA (
12
)
18.1
0.0181
Hypothalamus
CACCACCACT (
20
)
5.4
0.0054
Hypothalamus
TCCACCAGTT (
2
)
3.6
0.0036
Hypothalamus
AAAAATAAAG (
7
)
1.8
0.0018
E12.5 retina
CACCACCACT (
20
)
5.6
0.0056
E12.5 retina
ACAAAATAAA (
12
)
3.8
0.0038
E12.5 retina
AAAAATAAAG (
7
)
1.9
0.0019
E12.5 retina
AAAATAAAGA
(
4
)
1.9
0.0019
E14.5 retina
ACAAAATAAA (
12
)
5.5
0.0055
E14.5 retina
ATGAGCAACA (
5
)
3.6
0.0036
E14.5 retina
CACCACCACT (
20
)
3.6
0.0036
E14.5 retina
AAAAATAAAG (
7
)
1.8
0.0018
E14.5 retina
AGAATCAAAA (
4
)
1.8
0.0018
E14.5 retina
TCCACCAGTT (
2
)
1.8
0.0018
E16.5 retina
ACAAAATAAA (
12
)
7.2
0.0072
E16.5 retina
AAAACTTCAA (
6
)
1.8
0.0018
E16.5 retina
CACCACCACT (
20
)
1.8
0.0018
E16.5 retina
GAAAAAAATA (
16
)
1.8
0.0018
E18.5 retina
CACCACCACT (
20
)
5.5
0.0055
E18.5 retina
ACAAAATAAA (
12
)
3.6
0.0036
E18.5 retina
GAAAAAAATA (
16
)
1.8
0.0018
P0.5 retina
CACCACCACT (
20
)
3.9
0.0039
P2.5 retina
CACCACCACT (
20
)
5.3
0.0053
P2.5 retina
ACAAAATAAA (
12
)
3.5
0.0035
P2.5 retina
TCCACCAGTT (
2
)
1.8
0.0018
P4.5 retina
ACAAAATAAA (
12
)
13.9
0.0139
P4.5 retina
CACCACCACT (
20
)
4
0.004
P4.5 retina
AGAATCAAAA (
4
)
2
0.002
P4.5 retina
CAAAATGAAA (
3
)
2
0.002
P6.5 retina
ACAAAATAAA (
12
)
5
0.005
P6.5 retina
CACCACCACT (
20
)
5
0.005
P6.5 retina
AAAAATAAAG (
7
)
1.7
0.0017
P6.5 retina
CATATCTGTT
(
2
)
1.7
0.0017
P6.5 retina
TCCACCAGTT (
2
)
1.7
0.0017
P10.5 crx- retina
ACAAAATAAA (
12
)
7.4
0.0074
P10.5 crx- retina
CACCACCACT (
20
)
1.9
0.0019
P10.5 crx+ retina
ACAAAATAAA (
12
)
7.7
0.0077
P10.5 crx+ retina
CACCACCACT (
20
)
3.8
0.0038
P10.5 crx+ retina
AAAACTTCAA (
6
)
1.9
0.0019
Adult retinal
CACCACCACT (
20
)
9.3
0.0093
Adult retinal
ATGAGCAACA (
5
)
3.7
0.0037
Adult retinal
AAAAATAAAG (
7
)
1.9
0.0019
Adult retinal
AGAATCAAAA (
4
)
1.9
0.0019
ONL
TCCACCAGTT (
2
)
5.7
0.0057
ONL
AAAAATTAAA (
5
)
3.8
0.0038
ONL
ATGAGCAACA (
5
)
3.8
0.0038
ONL
CACCACCACT (
20
)
3.8
0.0038
ONL
ACAAAATAAA (
12
)
1.9
0.0019
