Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.151640	Rnf24	ring finger protein 24	2	2 74.0 cM	51902
Mm.151640	Pank2	pantothenate kinase 2 (Hallervorden-Spatz syndrome)	2		74450
Gene Ontology	pantothenate kinase activity
Human Homolog	PANK2[pantothenate kinase 2 (Hallervorden-Spatz syndrome)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTATTTTT (12) 3.3 0.0033 P8 Cb GC TAAAGCAATG (2) 1.6 0.0016 Cb medulloblastoma GCTTTGGCTT (7) 2.3 0.0023 Cb medulloblastoma TAATCGACCC (2) 2.3 0.0023 Cb medulloblastoma TTTTATTTTT (12) 2.3 0.0023 P8 GC+1d culture TTTTATTTTT (12) 3.4 0.0034 P8 GC+1d culture TAATCGACCC (2) 2.3 0.0023 P8 GC+1d culture GAGGGCGCTG (2) 1.1 0.0011 P8 GC+1d culture GTTCTGTCTT (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTATTTTT (12) 4.7 0.0047 P8 GC+SHH+1d culture TAATCGACCC (2) 3.5 0.0035 P8 GC+SHH+1d culture GCTTTGGCTT (7) 2.3 0.0023 P8 GC+SHH+1d culture GTTCTGTCTT (3) 1.2 0.0012 P8 GC+SHH+1d culture TCCACCAAGG (4) 1.2 0.0012 3T3 fibroblasts GCTTTGGCTT (7) 7 0.007 E15 cortex GCTTTGGCTT (7) 9.9 0.0099 E15 cortex GAGGGCGCTG (2) 4.9 0.0049 E15 cortex TAATCGACCC (2) 4.9 0.0049 P1 cortex CAAGCAAACA (5) 4.5 0.0045 P1 cortex GTTCTGTCTT (3) 4.5 0.0045 Hypothalamus TAATCGACCC (2) 3.6 0.0036 Hypothalamus TTTTATTTTT (12) 3.6 0.0036 E12.5 retina TTTTATTTTT (12) 7.5 0.0075 E12.5 retina CAAGCAAACA (5) 1.9 0.0019 E14.5 retina TTTTATTTTT (12) 3.6 0.0036 E14.5 retina TCCACCAAGG (4) 1.8 0.0018 E16.5 retina TTTTATTTTT (12) 3.6 0.0036 E16.5 retina ATCTGAGCTA (2) 1.8 0.0018 E16.5 retina CCTCTCCTTC (3) 1.8 0.0018 E16.5 retina GCTTTGGCTT (7) 1.8 0.0018 E16.5 retina TAATCGACCC (2) 1.8 0.0018 E16.5 retina TCCACCAAGG (4) 1.8 0.0018 E18.5 retina TTTTATTTTT (12) 12.7 0.0127 P0.5 retina TTTTATTTTT (12) 7.9 0.0079 P0.5 retina GAGGGCGCTG (2) 5.9 0.0059 P0.5 retina GCTTTGGCTT (7) 2 0.002 P0.5 retina TAATCGACCC (2) 2 0.002 P2.5 retina TTTTATTTTT (12) 5.3 0.0053 P2.5 retina ATGAGCAAGG (5) 1.8 0.0018 P2.5 retina CAAGCAAACA (5) 1.8 0.0018 P4.5 retina TTTTATTTTT (12) 2 0.002 P6.5 retina GCTTTGGCTT (7) 1.7 0.0017 P6.5 retina TTTTATTTTT (12) 1.7 0.0017 P10.5 crx- retina TAATCGACCC (2) 5.6 0.0056 P10.5 crx- retina GCTTTGGCTT (7) 3.7 0.0037 P10.5 crx- retina CCTCTCCTTC (3) 1.9 0.0019 P10.5 crx- retina GTTCTGTCTT (3) 1.9 0.0019 P10.5 crx- retina TTTTATTTTT (12) 1.9 0.0019 P10.5 crx+ retina TTTTATTTTT (12) 5.8 0.0058 P10.5 crx+ retina CAAGCAAACA (5) 1.9 0.0019 P10.5 crx+ retina GAGGGCGCTG (2) 1.9 0.0019 P10.5 crx+ retina TCCACCAAGG (4) 1.9 0.0019 Adult retinal GAGGGCGCTG (2) 5.6 0.0056 Adult retinal ATCTGAGCTA (2) 3.7 0.0037 Adult retinal ATGAGCAAGG (5) 3.7 0.0037 Adult retinal CCTCTCCTTC (3) 1.9 0.0019 Adult retinal GTTCTGTCTT (3) 1.9 0.0019 ONL GAGGGCGCTG (2) 3.8 0.0038 ONL TAAAGCAATG (2) 3.8 0.0038 ONL TTTTATTTTT (12) 3.8 0.0038