Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.1568	Grn	granulin	11	11 60.0 cM	14824
Gene Ontology	calcium ion binding | cytokine activity | extracellular space | lipid catabolism | mitochondrion | phospholipase A2 activity
Human Homolog	GRN[granulin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 151 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCCACCGTCC (4) 31 0.031 P8 Cb GC GGGGCCTCTG (3) 8.2 0.0082 P8 Cb GC GCCTAAAATA (4) 6.5 0.0065 P8 Cb GC GGAGGTGGAG (6) 4.9 0.0049 P8 Cb GC ATTTTTTTTT (36) 1.6 0.0016 P8 Cb GC GGAGGTGGAA (4) 1.6 0.0016 P8 Cb GC GGCTAAAATA (3) 1.6 0.0016 P8 Cb GC GGTGCCTCCT (2) 1.6 0.0016 Cb medulloblastoma GCCACCGTCC (4) 120.2 0.1202 Cb medulloblastoma GGGGCCTCTG (3) 9.2 0.0092 Cb medulloblastoma GAGGTGACTG (7) 4.6 0.0046 Cb medulloblastoma GGCACTGTCC (8) 4.6 0.0046 Cb medulloblastoma GGCTAAAATA (3) 4.6 0.0046 Cb medulloblastoma GAAGGTGGAA (4) 2.3 0.0023 P8 GC+1d culture GGAGGTGGAG (6) 33.1 0.0331 P8 GC+1d culture GGGGCCTCTG (3) 16 0.016 P8 GC+1d culture GGCACTGTCC (8) 4.6 0.0046 P8 GC+1d culture GCCTAAAATA (4) 3.4 0.0034 P8 GC+1d culture GGTGCCTCCT (2) 2.3 0.0023 P8 GC+1d culture TTTTTGAGGG 2.3 0.0023 P8 GC+1d culture ATTTTTTTTT (36) 1.1 0.0011 P8 GC+1d culture GCCAATGTCC (4) 1.1 0.0011 P8 GC+1d culture GGGCAGCTGG (12) 1.1 0.0011 P8 GC+SHH+1d culture GGAGGTGGAG (6) 14.1 0.0141 P8 GC+SHH+1d culture GGGGCCTCTG (3) 10.5 0.0105 P8 GC+SHH+1d culture GCCTAAAATA (4) 9.4 0.0094 P8 GC+SHH+1d culture GGCTAAAATA (3) 5.9 0.0059 P8 GC+SHH+1d culture ATTTTTTTTT (36) 3.5 0.0035 P8 GC+SHH+1d culture GCCACCGTCC (4) 3.5 0.0035 P8 GC+SHH+1d culture GGAGGTGGAA (4) 3.5 0.0035 P8 GC+SHH+1d culture GGCACTGTCC (8) 3.5 0.0035 P8 GC+SHH+1d culture GGGCAGCTGG (12) 3.5 0.0035 P8 GC+SHH+1d culture GGGCCTCTGG (4) 2.3 0.0023 P8 GC+SHH+1d culture GGTGCCTCCT (2) 2.3 0.0023 P8 GC+SHH+1d culture GGGCCCTCTG (6) 1.2 0.0012 3T3 fibroblasts GGGCAGCTGG (12) 21 0.021 3T3 fibroblasts GCCACCGTCC (4) 17.5 0.0175 3T3 fibroblasts GGAGGTGGAG (6) 7 0.007 3T3 fibroblasts GGAGGTGGAA (4) 3.5 0.0035 3T3 fibroblasts GGCTAAAATA (3) 3.5 0.0035 E15 cortex GGGGCCTCTG (3) 19.8 0.0198 E15 cortex GGAGGTGGAG (6) 14.8 0.0148 E15 cortex GGCACTGTCC (8) 14.8 0.0148 P1 cortex ATTTTTTTTT (36) 4.5 0.0045 P1 cortex GGCTAAAATA (3) 4.5 0.0045 P1 cortex GGGGCCTCTG (3) 4.5 0.0045 Hypothalamus GGGGCCTCTG (3) 14.5 0.0145 Hypothalamus GGCTAAAATA (3) 7.2 0.0072 Hypothalamus GGAGGTGGAG (6) 5.4 0.0054 Hypothalamus GGGCCTCTGG (4) 3.6 0.0036 Hypothalamus GGAGGTGGAA (4) 1.8 0.0018 Hypothalamus GGGCAGCTGG (12) 1.8 0.0018 Hypothalamus GGGCTCCTTG (5) 1.8 0.0018 E12.5 retina GGGGCCTCTG (3) 22.5 0.0225 E12.5 retina GCCACCGTCC (4) 3.8 0.0038 E12.5 retina GCCACTGTCC (2) 3.8 0.0038 E12.5 retina GGCTAAAATA (3) 3.8 0.0038 E12.5 retina GAAGGTGGAA (4) 1.9 0.0019 E12.5 retina GGAGGTGGAA (4) 1.9 0.0019 E12.5 retina GGCACTGTCC (8) 1.9 0.0019 E12.5 retina GGGCAGCTGG (12) 1.9 0.0019 E12.5 retina GGGCCTCTGG (4) 1.9 0.0019 E14.5 retina GGGGCCTCTG (3) 9.1 0.0091 E14.5 retina GTGATGGGGT (2) 7.3 0.0073 E14.5 retina GGCTAAAATA (3) 5.5 0.0055 E14.5 retina ATTTTTTTTT (36) 1.8 0.0018 E14.5 retina GAGGTGACTG (7) 1.8 0.0018 E14.5 retina GCCACCGTCC (4) 1.8 0.0018 E14.5 retina GGAGGTGGAA (4) 1.8 0.0018 E14.5 retina GGAGGTGGAG (6) 1.8 0.0018 E14.5 retina GGCACTGTCC (8) 1.8 0.0018 E14.5 retina GGGCTCCTTG (5) 1.8 0.0018 E16.5 retina GGGGCCTCTG (3) 12.7 0.0127 E16.5 retina GCCAATGTCC (4) 7.2 0.0072 E16.5 retina GGAGGTGGAG (6) 5.4 0.0054 E16.5 retina GGCTAAAATA (3) 3.6 0.0036 E16.5 retina GGGCCTCTGG (4) 3.6 0.0036 E16.5 retina GTGATGGGGT (2) 3.6 0.0036 E16.5 retina GGGCAGCTGG (12) 1.8 0.0018 E18.5 retina GGGGCCTCTG (3) 21.8 0.0218 E18.5 retina GGCTAAAATA (3) 7.3 0.0073 E18.5 retina GGAGGTGGAG (6) 3.6 0.0036 E18.5 retina GGGCCTCTGG (4) 3.6 0.0036 E18.5 retina ATTTTTTTTT (36) 1.8 0.0018 E18.5 retina GGAGGTGGAA (4) 1.8 0.0018 E18.5 retina GTGATGGGGT (2) 1.8 0.0018 P0.5 retina GGGGCCTCTG (3) 13.7 0.0137 P0.5 retina GGAGGTGGAG (6) 5.9 0.0059 P0.5 retina GGCACTGTCC (8) 5.9 0.0059 P0.5 retina ATTTTTTTTT (36) 3.9 0.0039 P0.5 retina GGCTAAAATA (3) 3.9 0.0039 P0.5 retina GGGCCTCTGG (4) 3.9 0.0039 P0.5 retina GCCACCGTCC (4) 2 0.002 P0.5 retina GGGCAGCTGG (12) 2 0.002 P2.5 retina GGGGCCTCTG (3) 29.9 0.0299 P2.5 retina GGCACTGTCC (8) 7 0.007 P2.5 retina GGCTAAAATA (3) 7 0.007 P2.5 retina ATTTTTTTTT (36) 3.5 0.0035 P2.5 retina GGAGGTGGAG (6) 3.5 0.0035 P2.5 retina GGGCCTCTGG (4) 3.5 0.0035 P2.5 retina GAAGGTGGAA (4) 1.8 0.0018 P2.5 retina GGGCAGCTGG (12) 1.8 0.0018 P2.5 retina GGGCTCCTTG (5) 1.8 0.0018 P2.5 retina GTGATGGGGT (2) 1.8 0.0018 P4.5 retina GGGGCCTCTG (3) 23.8 0.0238 P4.5 retina GGCTAAAATA (3) 7.9 0.0079 P4.5 retina GGAGGTGGAG (6) 5.9 0.0059 P4.5 retina ATTTTTTTTT (36) 4 0.004 P4.5 retina GGAGGTGGAA (4) 4 0.004 P4.5 retina GGGCCTCTGG (4) 4 0.004 P4.5 retina GGGCAGCTGG (12) 2 0.002 P4.5 retina GGGCCCTCTG (6) 2 0.002 P6.5 retina GGGGCCTCTG (3) 15 0.015 P6.5 retina GGCACTGTCC (8) 13.3 0.0133 P6.5 retina GGCTAAAATA (3) 8.3 0.0083 P6.5 retina GGGCCTCTGG (4) 6.7 0.0067 P6.5 retina GGAGGTGGAG (6) 3.3 0.0033 P6.5 retina GAAGGTGGAA (4) 1.7 0.0017 P6.5 retina GCCAATGTCC (4) 1.7 0.0017 P6.5 retina GGGCAGCTGG (12) 1.7 0.0017 P6.5 retina GGTGCCTCCT (2) 1.7 0.0017 P10.5 crx- retina GGGGCCTCTG (3) 27.9 0.0279 P10.5 crx- retina GCCTAAAATA (4) 14.9 0.0149 P10.5 crx- retina GCCACCGTCC (4) 13 0.013 P10.5 crx- retina GGAGGTGGAG (6) 7.4 0.0074 P10.5 crx- retina GGGCAGCTGG (12) 5.6 0.0056 P10.5 crx- retina GGCACTGTCC (8) 1.9 0.0019 P10.5 crx- retina GGCTAAAATA (3) 1.9 0.0019 P10.5 crx- retina GGGCCCTCTG (6) 1.9 0.0019 P10.5 crx+ retina GCCACCGTCC (4) 86.5 0.0865 P10.5 crx+ retina GGGGCCTCTG (3) 23.1 0.0231 P10.5 crx+ retina GGAGGTGGAG (6) 5.8 0.0058 P10.5 crx+ retina GCCTAAAATA (4) 3.8 0.0038 P10.5 crx+ retina GGCACTGTCC (8) 1.9 0.0019 P10.5 crx+ retina GGCTAAAATA (3) 1.9 0.0019 P10.5 crx+ retina GGGCCCTCTG (6) 1.9 0.0019 P10.5 crx+ retina GGGCCTCTGG (4) 1.9 0.0019 Adult retinal GGGGCCTCTG (3) 14.8 0.0148 Adult retinal GGGCAGCTGG (12) 7.4 0.0074 Adult retinal GAGGTGACTG (7) 1.9 0.0019 Adult retinal GGAGGTGGAG (6) 1.9 0.0019 Adult retinal GGCACTGTCC (8) 1.9 0.0019 Adult retinal GGCTAAAATA (3) 1.9 0.0019 Adult retinal GGGCCCTCTG (6) 1.9 0.0019 Adult retinal GGGCCTCTGG (4) 1.9 0.0019 Adult retinal GGGCTCCTTG (5) 1.9 0.0019 ONL GGAGGTGGAG (6) 3.8 0.0038 ONL GGGCCTCTGG (4) 3.8 0.0038 ONL GGGGCCTCTG (3) 3.8 0.0038 ONL GGAGGTGGAA (4) 1.9 0.0019 ONL GGGCAGCTGG (12) 1.9 0.0019