Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.15711	Cnp1	cyclic nucleotide phosphodiesterase 1	11	11 60.0 cM	12799
Gene Ontology	2',3'-cyclic-nucleotide 3'-phosphodiesterase activity | cyclic nucleotide catabolism | hydrolase activity | membrane
Human Homolog	CNP[2',3'-cyclic nucleotide 3' phosphodiesterase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTCCACTG (5) 4.9 0.0049 P8 Cb GC GTGCTGGAGA (13) 3.3 0.0033 P8 Cb GC TTAATCCCAA (4) 3.3 0.0033 P8 Cb GC TTAATCCCAG (2) 3.3 0.0033 P8 Cb GC CAAGGGAGAA (5) 1.6 0.0016 P8 Cb GC CAGGCAAAGA (3) 1.6 0.0016 P8 Cb GC CCTTCCACCT (3) 1.6 0.0016 P8 Cb GC CTGCTGGAGA (6) 1.6 0.0016 Cb medulloblastoma TTAATCCCAA (4) 41.6 0.0416 Cb medulloblastoma CCTTCCACCT (3) 2.3 0.0023 Cb medulloblastoma CCTTCCACTG (5) 2.3 0.0023 Cb medulloblastoma GAGGAGGGAG (6) 2.3 0.0023 P8 GC+1d culture CAAGGGAGAA (5) 3.4 0.0034 P8 GC+1d culture GGCTGGGCAG (6) 3.4 0.0034 P8 GC+1d culture CAGGCAAGAT (2) 1.1 0.0011 P8 GC+1d culture CCTTCCACCT (3) 1.1 0.0011 P8 GC+1d culture CCTTCCACTG (5) 1.1 0.0011 P8 GC+1d culture GAGGAGGGAG (6) 1.1 0.0011 P8 GC+1d culture GTGCTGGAGA (13) 1.1 0.0011 P8 GC+SHH+1d culture GGCTGGGCAG (6) 2.3 0.0023 P8 GC+SHH+1d culture TTAATCCCAA (4) 2.3 0.0023 P8 GC+SHH+1d culture CCTTCCACCT (3) 1.2 0.0012 P8 GC+SHH+1d culture GAGGAGGGAG (6) 1.2 0.0012 3T3 fibroblasts GAGGAGGGAG (6) 7 0.007 3T3 fibroblasts CAGGCAAGAT (2) 3.5 0.0035 3T3 fibroblasts GGCTGGGCAG (6) 3.5 0.0035 E15 cortex TAGGCCAGAA (2) 9.9 0.0099 E15 cortex GAGGAGGGAG (6) 4.9 0.0049 E15 cortex GTGCTGGAGA (13) 4.9 0.0049 P1 cortex GAGGAGGGAG (6) 4.5 0.0045 Hypothalamus TTAATCCCAA (4) 23.5 0.0235 Hypothalamus CCTTCCACCT (3) 5.4 0.0054 Hypothalamus CAGGCAAGAT (2) 3.6 0.0036 Hypothalamus CTGCTGGAGA (6) 1.8 0.0018 E12.5 retina GAGGAGGGAG (6) 5.6 0.0056 E14.5 retina CAGGCAAAGA (3) 3.6 0.0036 E14.5 retina CAGGCAAGAT (2) 1.8 0.0018 E14.5 retina GTGCTGGAGA (13) 1.8 0.0018 E16.5 retina CTGCTGGAGA (6) 3.6 0.0036 E16.5 retina CCTTCCACTG (5) 1.8 0.0018 E16.5 retina GAGGAGGGAG (6) 1.8 0.0018 E18.5 retina TTAATCCCAA (4) 12.7 0.0127 E18.5 retina AGCAGGTTTG (2) 1.8 0.0018 P0.5 retina TTAATCCCAA (4) 7.9 0.0079 P0.5 retina GAGGAGGGAG (6) 5.9 0.0059 P0.5 retina CAAGGGAGAA (5) 2 0.002 P0.5 retina CAGGCAAAGA (3) 2 0.002 P0.5 retina CCTTCCACCT (3) 2 0.002 P2.5 retina TTAATCCCAA (4) 5.3 0.0053 P2.5 retina TAGGCCAGAA (2) 3.5 0.0035 P2.5 retina CCTTCCACCT (3) 1.8 0.0018 P2.5 retina CTGCTGGAGA (6) 1.8 0.0018 P2.5 retina GTGCTGGAGA (13) 1.8 0.0018 P4.5 retina TTAATCCCAA (4) 21.8 0.0218 P4.5 retina CCTTCCACCT (3) 4 0.004 P4.5 retina AGCAGGTTTG (2) 2 0.002 P4.5 retina CAGGCAAAGA (3) 2 0.002 P4.5 retina GGCTGGGCAG (6) 2 0.002 P4.5 retina GTGCTGGAGA (13) 2 0.002 P6.5 retina GAGGAGGGAG (6) 3.3 0.0033 P6.5 retina TTAATCCCAA (4) 3.3 0.0033 P6.5 retina CAGGCAAAGA (3) 1.7 0.0017 P6.5 retina CCTTCCACTG (5) 1.7 0.0017 P6.5 retina GGCTGGGCAG (6) 1.7 0.0017 P10.5 crx- retina CCTTCCACCT (3) 5.6 0.0056 P10.5 crx- retina CCTTCCACTG (5) 3.7 0.0037 P10.5 crx- retina GAGGAGGGAG (6) 3.7 0.0037 P10.5 crx- retina GGCTGGGCAG (6) 3.7 0.0037 P10.5 crx- retina AGCAGGTTTG (2) 1.9 0.0019 P10.5 crx- retina GTGCTGGAGA (13) 1.9 0.0019 P10.5 crx+ retina CCTTCCACTG (5) 1.9 0.0019 P10.5 crx+ retina TTAATCCCAA (4) 1.9 0.0019 P10.5 crx+ retina TTAATCCCAG (2) 1.9 0.0019 Adult retinal GAGGAGGGAG (6) 11.1 0.0111 Adult retinal GTGCTGGAGA (13) 1.9 0.0019 ONL GTGCTGGAGA (13) 5.7 0.0057 ONL CAGGCAAAGA (3) 1.9 0.0019 ONL CAGGCAAGAT (2) 1.9 0.0019 ONL GAGGAGGGAG (6) 1.9 0.0019 ONL GGCTGGGCAG (6) 1.9 0.0019