Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.159185
D12Ertd771e
DNA segment, Chr 12, ERATO Doi 771, expressed
12
12 53.0 cM
52690
Mm.159185
4932441P12Rik
RIKEN cDNA 4932441P12 gene
12
74394
Mm.159185
6030490B17Rik
RIKEN cDNA 6030490B17 gene
12
77715
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 41 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TTCCTTGTTA
(
4
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
GAGGCTGGGA
(
9
)
1.1
0.0011
P8 GC+1d culture
GGGAGGAGAG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
GAGGCTGGGA
(
9
)
3.5
0.0035
P8 GC+SHH+1d culture
GGGAGGAGAG (
7
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GGGAGGAGAG (
7
)
7
0.007
3T3 fibroblasts
GTAAAGAAGC (
10
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
GGGAGGAGAG (
7
)
4.5
0.0045
P1 cortex
GTAAAGAAGC (
10
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GGGAGGAGAG (
7
)
1.8
0.0018
Hypothalamus
TTCCTTGTTA
(
4
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
GGGAGGAGAG (
7
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TTCCTTGTTA
(
4
)
3.9
0.0039
P0.5 retina
GAGGCTGGGA
(
9
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GTAAAGAAGC (
10
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
GGGAGGAGAG (
7
)
4
0.004
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GAGGCTGGGA
(
9
)
5
0.005
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
GGGAGGAGAG (
7
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TTCCTTGTTA
(
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
GGGAGGAGAG (
7
)
1.9
0.0019
ONL
TTCCTTGTTA
(
4
)
1.9
0.0019
