Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.166372	Rnf130	ring finger protein 130	11		59044
Gene Ontology	extracellular space | integral to membrane | peptidase activity | proteolysis and peptidolysis
Human Homolog	RNF130[ring finger protein 130]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 73 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC TCTAATCTGT (4) 3.3 0.0033 P8 Cb GC AACCTCTATG (5) 1.6 0.0016 P8 Cb GC CCACACAAGC (4) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma AACCTCTATG (5) 18.5 0.0185 Cb medulloblastoma CCACACAAGC (4) 6.9 0.0069 Cb medulloblastoma AAGACTTGAG (2) 2.3 0.0023 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture AACCTCTATG (5) 6.8 0.0068 P8 GC+1d culture CCACACAAGC (4) 6.8 0.0068 P8 GC+1d culture CACAACAAAG (2) 2.3 0.0023 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture AACCTCTATG (5) 1.2 0.0012 P8 GC+SHH+1d culture ACACTTTTAT (7) 1.2 0.0012 P8 GC+SHH+1d culture CACAACAAAG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCACACAAGC (4) 1.2 0.0012 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex AACCTCTATG (5) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex AACCTCTATG (5) 4.5 0.0045 P1 cortex TCTAATCTGT (4) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus CCACACAAGC (4) 5.4 0.0054 Hypothalamus AACCTCTATG (5) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CCACACAAGC (4) 9.4 0.0094 E12.5 retina ACACTTTTAT (7) 1.9 0.0019 E12.5 retina CACAACAAAG (2) 1.9 0.0019 E12.5 retina CCACCTTCCT (4) 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina ACACTTTTAT (7) 5.5 0.0055 E14.5 retina CCACACAAGC (4) 5.5 0.0055 E14.5 retina CCACCTTCCT (4) 3.6 0.0036 E14.5 retina CACAACAAAG (2) 1.8 0.0018 E16.5 retina CCACACAAGC (4) 10.9 0.0109 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina ACACTTTTAT (7) 3.6 0.0036 E16.5 retina CCACCTTCCT (4) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina CCACACAAGC (4) 5.5 0.0055 E18.5 retina CACAACAAAG (2) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina CCACACAAGC (4) 7.9 0.0079 P0.5 retina CCACCTTCCT (4) 3.9 0.0039 P0.5 retina AACCTCTATG (5) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina AACCTCTATG (5) 1.8 0.0018 P2.5 retina AGATTTTTGT (3) 1.8 0.0018 P2.5 retina CCACACAAGC (4) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina AACCTCTATG (5) 7.9 0.0079 P4.5 retina CACAACAAAG (2) 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina AACCTCTATG (5) 6.7 0.0067 P6.5 retina CACAACAAAG (2) 1.7 0.0017 P6.5 retina CCACACAAGC (4) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina CCACACAAGC (4) 9.3 0.0093 P10.5 crx- retina AACCTCTATG (5) 7.4 0.0074 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CCACACAAGC (4) 7.7 0.0077 P10.5 crx+ retina AACCTCTATG (5) 3.8 0.0038 P10.5 crx+ retina AGATTTTTGT (3) 1.9 0.0019 P10.5 crx+ retina CACAACAAAG (2) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal AAGACTTGAG (2) 3.7 0.0037 Adult retinal ACACTTTTAT (7) 1.9 0.0019 Adult retinal AGATTTTTGT (3) 1.9 0.0019 Adult retinal CCACACAAGC (4) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL AAGACTTGAG (2) 1.9 0.0019 ONL AGATTTTTGT (3) 1.9 0.0019