Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.180622
1110032N12Rik
RIKEN cDNA 1110032N12 gene
11
68730
Human Homolog
PP3111[PP3111 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 63 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGTTCCGAC (
2
)
32.6
0.0326
P8 Cb GC
GCGGCGGATG (
3
)
26.1
0.0261
P8 Cb GC
CGTGACTGGC
(
3
)
6.5
0.0065
Cb medulloblastoma
TAGTTCCGAC (
2
)
18.5
0.0185
Cb medulloblastoma
GCGGCGGATG (
3
)
13.9
0.0139
Cb medulloblastoma
GCTGCCCTGG (
12
)
6.9
0.0069
P8 GC+1d culture
GCGGCGGATG (
3
)
34.2
0.0342
P8 GC+1d culture
TAGTTCCGAC (
2
)
19.4
0.0194
P8 GC+1d culture
GCTGCCCTGG (
12
)
2.3
0.0023
P8 GC+1d culture
GATTGCTTTT
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TAGTTCCGAC (
2
)
22.2
0.0222
P8 GC+SHH+1d culture
GCGGCGGATG (
3
)
21.1
0.0211
P8 GC+SHH+1d culture
GATTGCTTTT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GCTGCCCTGG (
12
)
1.2
0.0012
3T3 fibroblasts
GCGGCGGATG (
3
)
2351.8
2.3518
3T3 fibroblasts
TAGTTCCGAC (
2
)
10.5
0.0105
3T3 fibroblasts
AGTGCAGAGG
(
7
)
3.5
0.0035
3T3 fibroblasts
GCTGCCCTGG (
12
)
3.5
0.0035
E15 cortex
TAGTTCCGAC (
2
)
29.7
0.0297
E15 cortex
GCGGCGGATG (
3
)
4.9
0.0049
E15 cortex
GCTGCCCTGG (
12
)
4.9
0.0049
P1 cortex
TAGTTCCGAC (
2
)
13.6
0.0136
P1 cortex
GCGGCGGATG (
3
)
4.5
0.0045
Hypothalamus
TAGTTCCGAC (
2
)
47.1
0.0471
Hypothalamus
GCGGCGGATG (
3
)
3.6
0.0036
Hypothalamus
CGTGACTGGC
(
3
)
1.8
0.0018
Hypothalamus
GCTGCCCTGG (
12
)
1.8
0.0018
E12.5 retina
TAGTTCCGAC (
2
)
31.9
0.0319
E12.5 retina
GCGGCGGATG (
3
)
15
0.015
E12.5 retina
CGTGACTGGC
(
3
)
3.8
0.0038
E12.5 retina
GATTGCTTTT
(
2
)
1.9
0.0019
E14.5 retina
TAGTTCCGAC (
2
)
32.8
0.0328
E14.5 retina
GCGGCGGATG (
3
)
5.5
0.0055
E14.5 retina
GCTGCCCTGG (
12
)
1.8
0.0018
E16.5 retina
TAGTTCCGAC (
2
)
39.8
0.0398
E16.5 retina
GCGGCGGATG (
3
)
5.4
0.0054
E16.5 retina
GCTGCCCTGG (
12
)
1.8
0.0018
E18.5 retina
TAGTTCCGAC (
2
)
40
0.04
E18.5 retina
GCGGCGGATG (
3
)
1.8
0.0018
P0.5 retina
TAGTTCCGAC (
2
)
41.2
0.0412
P0.5 retina
GATTGCTTTT
(
2
)
3.9
0.0039
P2.5 retina
TAGTTCCGAC (
2
)
31.7
0.0317
P2.5 retina
GCGGCGGATG (
3
)
5.3
0.0053
P2.5 retina
GCTGCCCTGG (
12
)
3.5
0.0035
P4.5 retina
TAGTTCCGAC (
2
)
41.6
0.0416
P4.5 retina
GCGGCGGATG (
3
)
5.9
0.0059
P6.5 retina
TAGTTCCGAC (
2
)
36.7
0.0367
P6.5 retina
GCGGCGGATG (
3
)
13.3
0.0133
P6.5 retina
AGTGCAGAGG
(
7
)
3.3
0.0033
P6.5 retina
GATTGCTTTT
(
2
)
1.7
0.0017
P10.5 crx- retina
GCGGCGGATG (
3
)
33.4
0.0334
P10.5 crx- retina
TAGTTCCGAC (
2
)
18.6
0.0186
P10.5 crx- retina
CGTGACTGGC
(
3
)
3.7
0.0037
P10.5 crx+ retina
TAGTTCCGAC (
2
)
25
0.025
P10.5 crx+ retina
GCGGCGGATG (
3
)
15.4
0.0154
P10.5 crx+ retina
GGCTGCCCTG (
12
)
3.8
0.0038
P10.5 crx+ retina
CGTGACTGGC
(
3
)
1.9
0.0019
Adult retinal
TAGTTCCGAC (
2
)
22.2
0.0222
Adult retinal
GCGGCGGATG (
3
)
3.7
0.0037
Adult retinal
GCTGCCCTGG (
12
)
3.7
0.0037
Adult retinal
GGCTGCCCTG (
12
)
1.9
0.0019
ONL
TAGTTCCGAC (
2
)
17.2
0.0172
ONL
GCGGCGGATG (
3
)
1.9
0.0019
