Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.182746	Mtpn	myotrophin	6		14489
Gene Ontology	DNA binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	MTPN[myotrophin]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 136 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTGTTAAAA (4) 22.8 0.0228 P8 Cb GC AACAAAAAAA (18) 4.9 0.0049 P8 Cb GC TTAGCAACAT 4.9 0.0049 P8 Cb GC TACATCCGAA 3.3 0.0033 P8 Cb GC AATTTCTCTG (2) 1.6 0.0016 P8 Cb GC GTGTTTTGAG (2) 1.6 0.0016 Cb medulloblastoma TACATCCGAA 18.5 0.0185 Cb medulloblastoma TTTGTTAAAA (4) 16.2 0.0162 Cb medulloblastoma AACAAAAAAA (18) 9.2 0.0092 Cb medulloblastoma TGACAAAAAA (4) 4.6 0.0046 Cb medulloblastoma ACACTTAATG (3) 2.3 0.0023 Cb medulloblastoma ATCAGTCTAT (2) 2.3 0.0023 P8 GC+1d culture TTTGTTAAAA (4) 24 0.024 P8 GC+1d culture TACATCCGAA 12.6 0.0126 P8 GC+1d culture AACAAAAAAA (18) 3.4 0.0034 P8 GC+1d culture AGCACTTTAA (2) 3.4 0.0034 P8 GC+1d culture ATCAGTCTAT (2) 3.4 0.0034 P8 GC+1d culture ACACTTAATG (3) 2.3 0.0023 P8 GC+1d culture AAATTGCTTC (2) 1.1 0.0011 P8 GC+1d culture GTGGGTTTTT 1.1 0.0011 P8 GC+1d culture TTAGCAACAT 1.1 0.0011 P8 GC+SHH+1d culture TACATCCGAA 23.4 0.0234 P8 GC+SHH+1d culture TTTGTTAAAA (4) 16.4 0.0164 P8 GC+SHH+1d culture AACAAAAAAA (18) 5.9 0.0059 P8 GC+SHH+1d culture ACACTTAATG (3) 3.5 0.0035 P8 GC+SHH+1d culture TTAGCAACAT 3.5 0.0035 P8 GC+SHH+1d culture AGCACTTTAA (2) 2.3 0.0023 P8 GC+SHH+1d culture AAATTGCTTC (2) 1.2 0.0012 P8 GC+SHH+1d culture AACTCAAATA (5) 1.2 0.0012 P8 GC+SHH+1d culture ATCAGTCTAT (2) 1.2 0.0012 P8 GC+SHH+1d culture GTGGGTTTTT 1.2 0.0012 P8 GC+SHH+1d culture GTTAGTGTAC 1.2 0.0012 P8 GC+SHH+1d culture TGACAAAAAA (4) 1.2 0.0012 3T3 fibroblasts ATCAGTCTAT (2) 3.5 0.0035 3T3 fibroblasts TACATCCGAA 3.5 0.0035 E15 cortex AACAAAAAAA (18) 4.9 0.0049 E15 cortex TTTGTTAAAA (4) 4.9 0.0049 P1 cortex TTTGTTAAAA (4) 9.1 0.0091 P1 cortex ACACTTAATG (3) 4.5 0.0045 P1 cortex TACATCCGAA 4.5 0.0045 Hypothalamus TACATCCGAA 10.9 0.0109 Hypothalamus TGGGCCCCTG (4) 9.1 0.0091 Hypothalamus TTTGTTAAAA (4) 7.2 0.0072 Hypothalamus CAAAACACTG (2) 3.6 0.0036 Hypothalamus TTTGCTGCGT 3.6 0.0036 Hypothalamus AACAAAAAAA (18) 1.8 0.0018 Hypothalamus AACTCAAATA (5) 1.8 0.0018 Hypothalamus ATCAGTCTAT (2) 1.8 0.0018 Hypothalamus TTAGCAACAT 1.8 0.0018 E12.5 retina TACATCCGAA 11.3 0.0113 E12.5 retina ACACTTAATG (3) 5.6 0.0056 E12.5 retina TTTGTTAAAA (4) 5.6 0.0056 E12.5 retina AACAAAAAAA (18) 3.8 0.0038 E12.5 retina TTAGCAACAT 3.8 0.0038 E12.5 retina GTGTTTTGAG (2) 1.9 0.0019 E14.5 retina TTTGTTAAAA (4) 14.6 0.0146 E14.5 retina ACACTTAATG (3) 7.3 0.0073 E14.5 retina AACAAAAAAA (18) 1.8 0.0018 E14.5 retina TACATCCGAA 1.8 0.0018 E16.5 retina TACATCCGAA 9.1 0.0091 E16.5 retina TGGGCCCCTG (4) 5.4 0.0054 E16.5 retina TTTGTTAAAA (4) 5.4 0.0054 E16.5 retina GAGTCGGAGC (4) 3.6 0.0036 E16.5 retina ACACTTAATG (3) 1.8 0.0018 E16.5 retina GAAAAGGCCA (2) 1.8 0.0018 E16.5 retina GTGGGTTTTT 1.8 0.0018 E16.5 retina TTTTGGGGAG (2) 1.8 0.0018 E18.5 retina TTTGTTAAAA (4) 54.6 0.0546 E18.5 retina AACAAAAAAA (18) 5.5 0.0055 E18.5 retina AACAATAAAA (4) 5.5 0.0055 E18.5 retina ACACTTAATG (3) 1.8 0.0018 E18.5 retina TACATCCGAA 1.8 0.0018 E18.5 retina TTAGCAACAT 1.8 0.0018 E18.5 retina TTTGCTGCGT 1.8 0.0018 P0.5 retina TACATCCGAA 3.9 0.0039 P0.5 retina TTTGTTAAAA (4) 3.9 0.0039 P0.5 retina AACAAAAAAA (18) 2 0.002 P0.5 retina GTTAGTGTAC 2 0.002 P0.5 retina TGACAAAAAA (4) 2 0.002 P0.5 retina TGGGCCCTGG (8) 2 0.002 P0.5 retina TTAGCAACAT 2 0.002 P0.5 retina TTTTGGGGAG (2) 2 0.002 P2.5 retina TTTGTTAAAA (4) 24.6 0.0246 P2.5 retina TACATCCGAA 14.1 0.0141 P2.5 retina AACAAAAAAA (18) 3.5 0.0035 P2.5 retina TGGGCCCCTG (4) 3.5 0.0035 P2.5 retina AACTCAAATA (5) 1.8 0.0018 P2.5 retina AATTTCTCTG (2) 1.8 0.0018 P2.5 retina GTGGGTTTTT 1.8 0.0018 P2.5 retina GTTAGTGTAC 1.8 0.0018 P4.5 retina TTTGTTAAAA (4) 29.7 0.0297 P4.5 retina TACATCCGAA 25.8 0.0258 P4.5 retina AACAAAAAAA (18) 4 0.004 P4.5 retina AACAATAAAA (4) 2 0.002 P4.5 retina AATTTCTCTG (2) 2 0.002 P4.5 retina ACACTTAATG (3) 2 0.002 P4.5 retina GAAAAGGCCA (2) 2 0.002 P4.5 retina GTGTTTTGAG (2) 2 0.002 P4.5 retina TTTGCTGCGT 2 0.002 P4.5 retina TTTTGGGGAG (2) 2 0.002 P6.5 retina TTTGTTAAAA (4) 16.7 0.0167 P6.5 retina TACATCCGAA 8.3 0.0083 P6.5 retina TTAGCAACAT 3.3 0.0033 P6.5 retina AATTTCTCTG (2) 1.7 0.0017 P6.5 retina ACACTTAATG (3) 1.7 0.0017 P6.5 retina CAAAACACTG (2) 1.7 0.0017 P6.5 retina GTTAGTGTAC 1.7 0.0017 P10.5 crx- retina TACATCCGAA 11.1 0.0111 P10.5 crx- retina TTTGTTAAAA (4) 9.3 0.0093 P10.5 crx- retina AACAAAAAAA (18) 3.7 0.0037 P10.5 crx- retina ACACTTAATG (3) 1.9 0.0019 P10.5 crx- retina AGCACTTTAA (2) 1.9 0.0019 P10.5 crx- retina GTTAGTGTAC 1.9 0.0019 P10.5 crx- retina TGGGCCCCTG (4) 1.9 0.0019 P10.5 crx- retina TGGGCCCTGG (8) 1.9 0.0019 P10.5 crx- retina TTAGCAACAT 1.9 0.0019 P10.5 crx+ retina TACATCCGAA 11.5 0.0115 P10.5 crx+ retina TTTGTTAAAA (4) 11.5 0.0115 P10.5 crx+ retina ACACTTAATG (3) 3.8 0.0038 P10.5 crx+ retina AACAAAAAAA (18) 1.9 0.0019 P10.5 crx+ retina AACAATAAAA (4) 1.9 0.0019 P10.5 crx+ retina TGGGCCCCTG (4) 1.9 0.0019 P10.5 crx+ retina TGGGCCCTGG (8) 1.9 0.0019 P10.5 crx+ retina TTTGCTGCGT 1.9 0.0019 P10.5 crx+ retina TTTTGGGGAG (2) 1.9 0.0019 Adult retinal TTTGTTAAAA (4) 9.3 0.0093 Adult retinal TACATCCGAA 7.4 0.0074 Adult retinal ATCAGTCTAT (2) 3.7 0.0037 Adult retinal AGCACTTTAA (2) 1.9 0.0019 ONL TTTGTTAAAA (4) 19.2 0.0192 ONL TACATCCGAA 5.7 0.0057 ONL AAATTGCTTC (2) 3.8 0.0038 ONL GAAAAGGCCA (2) 1.9 0.0019 ONL GAGTCGGAGC (4) 1.9 0.0019 ONL TGGGCCCTGG (8) 1.9 0.0019 ONL TTAGCAACAT 1.9 0.0019