Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.18630	Acadvl	acyl-Coenzyme A dehydrogenase, very long chain	11	11 38.0 cM	11370
Gene Ontology	acyl-CoA dehydrogenase activity | electron transport | fatty acid metabolism | mitochondrion | mitochondrion | oxidoreductase activity
Human Homolog	ACADVL[acyl-Coenzyme A dehydrogenase, very long chain]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 113 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGAGATTG (4) 14.7 0.0147 P8 Cb GC GGGACAGAAC (3) 4.9 0.0049 P8 Cb GC TGCCTTTTTT (5) 4.9 0.0049 P8 Cb GC TGCCTTCTCT (3) 3.3 0.0033 P8 Cb GC AAGGAACCAG 1.6 0.0016 P8 Cb GC GGAGCAGGAA (4) 1.6 0.0016 P8 Cb GC GGCCCAAGGC (8) 1.6 0.0016 P8 Cb GC GGGCTCCCTG (8) 1.6 0.0016 Cb medulloblastoma GGCCCAAGGC (8) 9.2 0.0092 Cb medulloblastoma GTGGAGATTG (4) 9.2 0.0092 Cb medulloblastoma AAGGAACCAG 2.3 0.0023 Cb medulloblastoma TGCCTTCTCT (3) 2.3 0.0023 Cb medulloblastoma TGCCTTTTTT (5) 2.3 0.0023 P8 GC+1d culture GTGGAGATTG (4) 16 0.016 P8 GC+1d culture GGCAGTCTGC (2) 5.7 0.0057 P8 GC+1d culture GGCCCAAGGC (8) 3.4 0.0034 P8 GC+1d culture AGAAAATGCT (4) 2.3 0.0023 P8 GC+1d culture GGGCTCCCTG (8) 2.3 0.0023 P8 GC+1d culture GGGGAAATAG (2) 1.1 0.0011 P8 GC+1d culture GGTAACCCCT 1.1 0.0011 P8 GC+1d culture TGCCTTCTCT (3) 1.1 0.0011 P8 GC+1d culture TGCCTTTTTT (5) 1.1 0.0011 P8 GC+SHH+1d culture GTGGAGATTG (4) 14.1 0.0141 P8 GC+SHH+1d culture GGCCCAAGGC (8) 7 0.007 P8 GC+SHH+1d culture GGCAGTCTGC (2) 3.5 0.0035 P8 GC+SHH+1d culture TGCCTTTTTT (5) 2.3 0.0023 P8 GC+SHH+1d culture GGGCTCCCTG (8) 1.2 0.0012 3T3 fibroblasts GGCCCAAGGC (8) 17.5 0.0175 E15 cortex GTGGAGATTG (4) 29.7 0.0297 E15 cortex GGCAGTCTGC (2) 4.9 0.0049 E15 cortex GGGCGGGGGG (11) 4.9 0.0049 E15 cortex GGGGAAATAG (2) 4.9 0.0049 P1 cortex GGCCCAAGGC (8) 9.1 0.0091 P1 cortex GGCAGTCTGC (2) 4.5 0.0045 P1 cortex GGGACAGAAC (3) 4.5 0.0045 P1 cortex GGGGAAATAG (2) 4.5 0.0045 P1 cortex GTGGAGATTG (4) 4.5 0.0045 Hypothalamus GGCCCAAGGC (8) 12.7 0.0127 Hypothalamus TGCCTTCTCT (3) 5.4 0.0054 Hypothalamus GGCAGTCTGC (2) 3.6 0.0036 Hypothalamus AGAAAATGCT (4) 1.8 0.0018 Hypothalamus GGGCTCCCTG (8) 1.8 0.0018 Hypothalamus GTGGAGATTG (4) 1.8 0.0018 Hypothalamus TGCCTTTTTT (5) 1.8 0.0018 E12.5 retina GTGGAGATTG (4) 11.3 0.0113 E12.5 retina TGCCTTCTCT (3) 9.4 0.0094 E12.5 retina GGCAGTCTGC (2) 3.8 0.0038 E12.5 retina GGAGCAGGAA (4) 1.9 0.0019 E12.5 retina GGCCCAAGGC (8) 1.9 0.0019 E12.5 retina GGGCGGGGGG (11) 1.9 0.0019 E12.5 retina GGGCTCCCTG (8) 1.9 0.0019 E14.5 retina GTGGAGATTG (4) 9.1 0.0091 E14.5 retina TGCCTTTTTT (5) 3.6 0.0036 E16.5 retina GTGGAGATTG (4) 18.1 0.0181 E16.5 retina TGCCTTCTCT (3) 5.4 0.0054 E16.5 retina AGAAAATGCT (4) 3.6 0.0036 E16.5 retina GGCCCAAGGC (8) 3.6 0.0036 E16.5 retina GTGGAGAATG (3) 3.6 0.0036 E16.5 retina TGCCTTTTTT (5) 3.6 0.0036 E16.5 retina AAGGAACCAG 1.8 0.0018 E16.5 retina GGCAGTCTGC (2) 1.8 0.0018 E18.5 retina GTGGAGATTG (4) 9.1 0.0091 E18.5 retina TGCCTTTTTT (5) 3.6 0.0036 E18.5 retina GGCCCAAGGC (8) 1.8 0.0018 E18.5 retina TGCCTTCTCT (3) 1.8 0.0018 P0.5 retina GTGGAGATTG (4) 9.8 0.0098 P0.5 retina TGCCTTTTTT (5) 3.9 0.0039 P0.5 retina AGAAAATGCT (4) 2 0.002 P0.5 retina GGCAGTCTGC (2) 2 0.002 P0.5 retina GGCCCAAGGC (8) 2 0.002 P0.5 retina TGCCTTCTCT (3) 2 0.002 P2.5 retina GTGGAGATTG (4) 8.8 0.0088 P2.5 retina TGCCTTCTCT (3) 7 0.007 P2.5 retina GGCAGTCTGC (2) 5.3 0.0053 P2.5 retina GGGCGGGGGG (11) 3.5 0.0035 P2.5 retina GGCCCAAGGC (8) 1.8 0.0018 P2.5 retina GGGCTCCCTG (8) 1.8 0.0018 P2.5 retina TGCCTTTTTT (5) 1.8 0.0018 P4.5 retina GTGGAGATTG (4) 11.9 0.0119 P4.5 retina TGCCTTCTCT (3) 7.9 0.0079 P4.5 retina GGCCCAAGGC (8) 4 0.004 P4.5 retina GGCAGTCTGC (2) 2 0.002 P4.5 retina GGTAACCCCT 2 0.002 P6.5 retina TGCCTTCTCT (3) 23.3 0.0233 P6.5 retina GGCCCAAGGC (8) 8.3 0.0083 P6.5 retina GTGGAGATTG (4) 8.3 0.0083 P6.5 retina GGAGCAGGAA (4) 3.3 0.0033 P6.5 retina TGCCTTTTTT (5) 3.3 0.0033 P10.5 crx- retina GGCCCAAGGC (8) 16.7 0.0167 P10.5 crx- retina TGCCTTCTCT (3) 11.1 0.0111 P10.5 crx- retina GTGGAGATTG (4) 9.3 0.0093 P10.5 crx- retina AGAAAATGCT (4) 3.7 0.0037 P10.5 crx- retina TGCCTTTTTT (5) 3.7 0.0037 P10.5 crx- retina GGCAGTCTGC (2) 1.9 0.0019 P10.5 crx+ retina TGCCTTCTCT (3) 26.9 0.0269 P10.5 crx+ retina GTGGAGATTG (4) 11.5 0.0115 P10.5 crx+ retina GGCCCAAGGC (8) 9.6 0.0096 P10.5 crx+ retina GGCAGTCTGC (2) 5.8 0.0058 P10.5 crx+ retina TGCCTTTTTT (5) 3.8 0.0038 P10.5 crx+ retina GGTAACCCCT 1.9 0.0019 Adult retinal TGCCTTCTCT (3) 27.8 0.0278 Adult retinal GGCCCAAGGC (8) 9.3 0.0093 Adult retinal GGCAGTCTGC (2) 5.6 0.0056 Adult retinal GTGGAGATTG (4) 5.6 0.0056 Adult retinal TGCCTTTTTT (5) 1.9 0.0019 ONL TGCCTTCTCT (3) 11.5 0.0115 ONL ACCTTGGTGT 5.7 0.0057 ONL TGCCTTTTTT (5) 5.7 0.0057 ONL GGCCCAAGGC (8) 3.8 0.0038 ONL AAGGAACCAG 1.9 0.0019 ONL AGAAAATGCT (4) 1.9 0.0019 ONL GGCAGTCTGC (2) 1.9 0.0019 ONL GTGGAGAATG (3) 1.9 0.0019