Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.193925	Gna13	guanine nucleotide binding protein, alpha 13	11	11 68.0 cM	14674
Mm.193925	C85143	expressed sequence C85143	11		97743
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 143 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC TTGGGTTTTT (9) 8.2 0.0082 P8 Cb GC GTTCTACATC (2) 6.5 0.0065 P8 Cb GC AGTCAAGGGA (2) 3.3 0.0033 P8 Cb GC GCATTGTTTT (9) 1.6 0.0016 P8 Cb GC GCTGCCCCAG (5) 1.6 0.0016 P8 Cb GC GCTGCCTCCC (7) 1.6 0.0016 P8 Cb GC GTTAATGCTA (5) 1.6 0.0016 P8 Cb GC GTTTATGCTA (2) 1.6 0.0016 P8 Cb GC TGCCACAGCT (5) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma TATGTCAGTA (4) 9.2 0.0092 Cb medulloblastoma AGTCAAGGGA (2) 2.3 0.0023 Cb medulloblastoma TTGGGTTTTT (9) 2.3 0.0023 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture TTGGGTTTTT (9) 4.6 0.0046 P8 GC+1d culture GTTAATGCTA (5) 2.3 0.0023 P8 GC+1d culture AGTCAAGGGA (2) 1.1 0.0011 P8 GC+1d culture GCTGCCCCAG (5) 1.1 0.0011 P8 GC+1d culture GTTCTACATC (2) 1.1 0.0011 P8 GC+1d culture GTTTATGCTA (2) 1.1 0.0011 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture GTTAATGCTA (5) 3.5 0.0035 P8 GC+SHH+1d culture GTTTATGCTA (2) 3.5 0.0035 P8 GC+SHH+1d culture TTGGGTTTTT (9) 3.5 0.0035 P8 GC+SHH+1d culture ACGTTCAAAC (2) 1.2 0.0012 P8 GC+SHH+1d culture TAATAAACAT (5) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts TGCCACAGCT (5) 7 0.007 3T3 fibroblasts AGTCAAGGGA (2) 3.5 0.0035 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 3T3 fibroblasts TTGGGTTTTT (9) 3.5 0.0035 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex GCTGCCCCAG (5) 9.9 0.0099 E15 cortex GCTGCCCAGG (10) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 E15 cortex TTGGGTTTTT (9) 4.9 0.0049 P1 cortex AGTCAAGGGA (2) 4.5 0.0045 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GCATTGTTTT (9) 4.5 0.0045 P1 cortex GCTGCCCCAG (5) 4.5 0.0045 P1 cortex TGCCACAGCT (5) 4.5 0.0045 P1 cortex TTGGGTTTTT (9) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus TATGTCAGTA (4) 14.5 0.0145 Hypothalamus ACGTTCAAAC (2) 1.8 0.0018 Hypothalamus AGTCAAGGGA (2) 1.8 0.0018 Hypothalamus GCATTGTTTT (9) 1.8 0.0018 Hypothalamus GTTCTACATC (2) 1.8 0.0018 Hypothalamus GTTTATGCTA (2) 1.8 0.0018 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina GTTAATGCTA (5) 3.8 0.0038 E12.5 retina TTGGGTTTTT (9) 3.8 0.0038 E12.5 retina GTTCTACATC (2) 1.9 0.0019 E12.5 retina GTTTATGCTA (2) 1.9 0.0019 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina TTGGGTTTTT (9) 7.3 0.0073 E14.5 retina TATGTCAGTA (4) 5.5 0.0055 E14.5 retina GTTAATGCTA (5) 3.6 0.0036 E14.5 retina GCATTGTTTT (9) 1.8 0.0018 E14.5 retina GTTCTACATC (2) 1.8 0.0018 E16.5 retina TATGTCAGTA (4) 14.5 0.0145 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina TTGGGTTTTT (9) 5.4 0.0054 E16.5 retina ACGTTCAAAC (2) 3.6 0.0036 E16.5 retina AGTCAAGGGA (2) 1.8 0.0018 E16.5 retina GCATTGTTTT (9) 1.8 0.0018 E16.5 retina GCTGCCCAGG (10) 1.8 0.0018 E16.5 retina GCTGCCCCAG (5) 1.8 0.0018 E16.5 retina GTTAATGCTA (5) 1.8 0.0018 E16.5 retina GTTTATGCTA (2) 1.8 0.0018 E16.5 retina GTTTCTGGCT (2) 1.8 0.0018 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina TATGTCAGTA (4) 12.7 0.0127 E18.5 retina TTGGGTTTTT (9) 5.5 0.0055 E18.5 retina TATGTTTGTT (3) 1.8 0.0018 E18.5 retina TGCCACAGCT (5) 1.8 0.0018 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina GTTAATGCTA (5) 9.8 0.0098 P0.5 retina GCTGCCTCCC (7) 3.9 0.0039 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TATGTCAGTA (4) 3.9 0.0039 P0.5 retina GCTGCCCCAG (5) 2 0.002 P0.5 retina GTTTATGCTA (2) 2 0.002 P0.5 retina TGCCACAGCT (5) 2 0.002 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina TATGTCAGTA (4) 21.1 0.0211 P2.5 retina GTTAATGCTA (5) 7 0.007 P2.5 retina TTGGGTTTTT (9) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTTTCTGGCT (2) 1.8 0.0018 P2.5 retina TGCCACAGCT (5) 1.8 0.0018 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina TATGTCAGTA (4) 11.9 0.0119 P4.5 retina TTGGGTTTTT (9) 7.9 0.0079 P4.5 retina GTTAATGCTA (5) 4 0.004 P4.5 retina GCATTGTTTT (9) 2 0.002 P4.5 retina GCTGCCTCCC (7) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTTCTACATC (2) 2 0.002 P4.5 retina TATGTTTGTT (3) 2 0.002 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GTTAATGCTA (5) 6.7 0.0067 P6.5 retina TATGTCAGTA (4) 6.7 0.0067 P6.5 retina TTGGGTTTTT (9) 5 0.005 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina ACGTTCAAAC (2) 1.7 0.0017 P6.5 retina GTTCTACATC (2) 1.7 0.0017 P6.5 retina TATGTTTGTT (3) 1.7 0.0017 P10.5 crx- retina TATGTCAGTA (4) 11.1 0.0111 P10.5 crx- retina TTGGGTTTTT (9) 9.3 0.0093 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GCTGCCCAGG (10) 1.9 0.0019 P10.5 crx- retina GTTAATGCTA (5) 1.9 0.0019 P10.5 crx- retina GTTTATGCTA (2) 1.9 0.0019 P10.5 crx+ retina TATGTCAGTA (4) 9.6 0.0096 P10.5 crx+ retina GTTAATGCTA (5) 3.8 0.0038 P10.5 crx+ retina ACGTTCAAAC (2) 1.9 0.0019 P10.5 crx+ retina AGTCAAGGGA (2) 1.9 0.0019 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GTTCTACATC (2) 1.9 0.0019 P10.5 crx+ retina GTTTATGCTA (2) 1.9 0.0019 P10.5 crx+ retina GTTTCTGGCT (2) 1.9 0.0019 P10.5 crx+ retina TGCCACAGCT (5) 1.9 0.0019 P10.5 crx+ retina TTGGGTTTTT (9) 1.9 0.0019 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal TATGTCAGTA (4) 5.6 0.0056 Adult retinal TTGGGTTTTT (9) 3.7 0.0037 Adult retinal GCTGCCCAGG (10) 1.9 0.0019 Adult retinal GCTGCCTCCC (7) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal TAATAAACAT (5) 1.9 0.0019 Adult retinal TGCCACAGCT (5) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL TATGTCAGTA (4) 5.7 0.0057 ONL ACGTTCAAAC (2) 1.9 0.0019 ONL AGTCAAGGGA (2) 1.9 0.0019 ONL GCAAAAAAAA (50) 1.9 0.0019 ONL GTTAATGCTA (5) 1.9 0.0019 ONL GTTTATGCTA (2) 1.9 0.0019 ONL TAATAAACAT (5) 1.9 0.0019 ONL TATGTTTGTT (3) 1.9 0.0019 ONL TTGGGTTTTT (9) 1.9 0.0019