Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196538	Rps11	ribosomal protein S11	7		27207
Gene Ontology	intracellular | protein biosynthesis | ribonucleoprotein complex | ribosome | RNA binding | rRNA binding | structural constituent of ribosome
Human Homolog	RPS11[ribosomal protein S11]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCTGTGCACC (2) 47.3 0.0473 P8 Cb GC TTCTTGTGAC (2) 8.2 0.0082 P8 Cb GC GTTAAAAAAA (26) 4.9 0.0049 Cb medulloblastoma GTTAAAAAAA (26) 25.4 0.0254 Cb medulloblastoma TCTGTGCACC (2) 2.3 0.0023 P8 GC+1d culture TCTGTGCACC (2) 44.5 0.0445 P8 GC+1d culture GTTAAAAAAA (26) 13.7 0.0137 P8 GC+1d culture TTCTTGTGAC (2) 4.6 0.0046 P8 GC+1d culture TGCAAGACTG (4) 2.3 0.0023 P8 GC+1d culture ATGCAGAGGA (7) 1.1 0.0011 P8 GC+1d culture CTGATCCCCA (3) 1.1 0.0011 P8 GC+SHH+1d culture TCTGTGCACC (2) 35.1 0.0351 P8 GC+SHH+1d culture GTTAAAAAAA (26) 16.4 0.0164 P8 GC+SHH+1d culture TTCTTGTGAC (2) 2.3 0.0023 P8 GC+SHH+1d culture CTGATCCCCA (3) 1.2 0.0012 P8 GC+SHH+1d culture TCTGTGGAAC (4) 1.2 0.0012 P8 GC+SHH+1d culture TGCAAGACTG (4) 1.2 0.0012 3T3 fibroblasts TCTGTGCACC (2) 171.7 0.1717 3T3 fibroblasts TTCTTGTGAC (2) 3.5 0.0035 E15 cortex TCTGTGCACC (2) 54.4 0.0544 E15 cortex GCTGCTGGAC (2) 4.9 0.0049 P1 cortex TCTGTGCACC (2) 22.7 0.0227 P1 cortex GTTAAAAAAA (26) 4.5 0.0045 Hypothalamus TCTGTGCACC (2) 16.3 0.0163 Hypothalamus GTTAAAAAAA (26) 9.1 0.0091 Hypothalamus ATGCAGAGGA (7) 1.8 0.0018 E12.5 retina TCTGTGCACC (2) 46.9 0.0469 E12.5 retina GTTAAAAAAA (26) 3.8 0.0038 E14.5 retina TCTGTGCACC (2) 21.9 0.0219 E14.5 retina GTTAAAAAAA (26) 20 0.02 E14.5 retina TTCTTGTGAC (2) 5.5 0.0055 E16.5 retina TCTGTGCACC (2) 21.7 0.0217 E16.5 retina GTTAAAAAAA (26) 16.3 0.0163 E16.5 retina TTCTTGTGAC (2) 9.1 0.0091 E16.5 retina TCTGTGCCCC (2) 3.6 0.0036 E18.5 retina GTTAAAAAAA (26) 27.3 0.0273 E18.5 retina TCTGTGCACC (2) 12.7 0.0127 E18.5 retina TGCAAGACTG (4) 3.6 0.0036 P0.5 retina TCTGTGCACC (2) 41.2 0.0412 P0.5 retina GTTAAAAAAA (26) 3.9 0.0039 P0.5 retina TGCAAGACTG (4) 3.9 0.0039 P0.5 retina CTGATCCCCA (3) 2 0.002 P0.5 retina TCTGTGGAAC (4) 2 0.002 P0.5 retina TTCTTGTGAC (2) 2 0.002 P2.5 retina TCTGTGCACC (2) 15.8 0.0158 P2.5 retina GTTAAAAAAA (26) 7 0.007 P2.5 retina ATGCAGAGGA (7) 1.8 0.0018 P2.5 retina GCTGCTGGAC (2) 1.8 0.0018 P2.5 retina TCTGTGGAAC (4) 1.8 0.0018 P4.5 retina TCTGTGCACC (2) 13.9 0.0139 P4.5 retina GTTAAAAAAA (26) 11.9 0.0119 P4.5 retina TTCTTGTGAC (2) 4 0.004 P6.5 retina TCTGTGCACC (2) 23.3 0.0233 P6.5 retina GTTAAAAAAA (26) 15 0.015 P6.5 retina CTGATCCCCA (3) 3.3 0.0033 P10.5 crx- retina TCTGTGCACC (2) 66.9 0.0669 P10.5 crx- retina GTTAAAAAAA (26) 5.6 0.0056 P10.5 crx+ retina TCTGTGCACC (2) 25 0.025 P10.5 crx+ retina GTTAAAAAAA (26) 15.4 0.0154 Adult retinal TCTGTGCACC (2) 18.5 0.0185 Adult retinal TTCTTGTGAC (2) 1.9 0.0019 ONL TCTGTGCACC (2) 36.4 0.0364 ONL GCTGCTGGAC (2) 3.8 0.0038 ONL GTTAAAAAAA (26) 3.8 0.0038 ONL TCTGTGCCCC (2) 1.9 0.0019 ONL TGCAAGACTG (4) 1.9 0.0019