Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196638	Cdc23	CDC23 (cell division cycle 23, yeast, homolog)	18	18 17.0 cM	52563
Gene Ontology	anaphase-promoting complex | cell cycle | mitosis | regulation of mitotic metaphase/anaphase transition
Human Homolog	KIF20A[kinesin family member 20A]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 111 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CTGTGTAATT (2) 8.2 0.0082 P8 Cb GC CACAAATATT (4) 4.9 0.0049 P8 Cb GC AACAGTTGAC (2) 3.3 0.0033 P8 Cb GC CACCACCACT (20) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CTGTGTAATT (2) 6.9 0.0069 Cb medulloblastoma CACAAATATT (4) 4.6 0.0046 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture CTGTGTAATT (2) 6.8 0.0068 P8 GC+1d culture CACCACCACT (20) 5.7 0.0057 P8 GC+1d culture CACAAATATT (4) 3.4 0.0034 P8 GC+1d culture TCTTTAATCC (30) 2.3 0.0023 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CACAAATATT (4) 12.9 0.0129 P8 GC+SHH+1d culture CTGTGTAATT (2) 4.7 0.0047 P8 GC+SHH+1d culture TCTTTAATCC (30) 4.7 0.0047 P8 GC+SHH+1d culture CACCACCACT (20) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TCTTTAATCC (30) 7 0.007 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex CTGTGTAATT (2) 4.9 0.0049 E15 cortex TCTTTAATCC (30) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TCTTTAATCC (30) 9.1 0.0091 P1 cortex CACCACCACT (20) 4.5 0.0045 P1 cortex GTGGGAAGAG (5) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CACCACCACT (20) 5.4 0.0054 Hypothalamus CTGTGTAATT (2) 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CACCACCACT (20) 5.6 0.0056 E12.5 retina ATCTGATGAG 3.8 0.0038 E12.5 retina CACAAATATT (4) 3.8 0.0038 E12.5 retina CTGTGTAATT (2) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TCTTTAATCC (30) 21.9 0.0219 E14.5 retina CACAAATATT (4) 5.5 0.0055 E14.5 retina CACCACCACT (20) 3.6 0.0036 E14.5 retina CTGTGTAATT (2) 1.8 0.0018 E14.5 retina GTGGGAAGAG (5) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina CACAAATATT (4) 12.7 0.0127 E16.5 retina TCTTTAATCC (30) 9.1 0.0091 E16.5 retina ATCTGATGAG 1.8 0.0018 E16.5 retina CACCACCACT (20) 1.8 0.0018 E16.5 retina CTGTGTAATT (2) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina ATCTGATGAG 7.3 0.0073 E18.5 retina CACCACCACT (20) 5.5 0.0055 E18.5 retina CACAAATATT (4) 1.8 0.0018 E18.5 retina TCTTTAATCC (30) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina CACCACCACT (20) 3.9 0.0039 P0.5 retina TCTTTAATCC (30) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CACAAATATT (4) 5.3 0.0053 P2.5 retina CACCACCACT (20) 5.3 0.0053 P2.5 retina ATCTGATGAG 1.8 0.0018 P2.5 retina CTGTGTAATT (2) 1.8 0.0018 P2.5 retina GTGGGAAGAG (5) 1.8 0.0018 P2.5 retina TCTTTAATCC (30) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TCTTTAATCC (30) 9.9 0.0099 P4.5 retina CACCACCACT (20) 4 0.004 P4.5 retina AACAGTTGAC (2) 2 0.002 P4.5 retina CACAAATATT (4) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACCACCACT (20) 5 0.005 P6.5 retina CACAAATATT (4) 1.7 0.0017 P6.5 retina CTGTGTAATT (2) 1.7 0.0017 P6.5 retina GTGGGAAGAG (5) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CTGTGTAATT (2) 13 0.013 P10.5 crx- retina CACAAATATT (4) 3.7 0.0037 P10.5 crx- retina CACCACCACT (20) 1.9 0.0019 P10.5 crx- retina TCTTTAATCC (30) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CTGTGTAATT (2) 5.8 0.0058 P10.5 crx+ retina CACCACCACT (20) 3.8 0.0038 P10.5 crx+ retina GCACCCAGCT (3) 3.8 0.0038 P10.5 crx+ retina AACAGTTGAC (2) 1.9 0.0019 P10.5 crx+ retina TCTTTAATCC (30) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CACCACCACT (20) 9.3 0.0093 Adult retinal CTGTGTAATT (2) 7.4 0.0074 Adult retinal TCTTTAATCC (30) 7.4 0.0074 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CCTTTAATCC (355) 84.3 0.0843 ONL TCTTTAATCC (30) 13.4 0.0134 ONL CTGTGTAATT (2) 5.7 0.0057 ONL CACCACCACT (20) 3.8 0.0038