Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.196721	AW822243	expressed sequence AW822243	12		105055
Mm.196721	Brf1	BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)	12		72308
Gene Ontology	biological_process unknown | cellular_component unknown | translation initiation factor activity
Human Homolog	BRF1[BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAGCAGCTGG (14) 1.6 0.0016 P8 Cb GC GTCAGAGAGT (2) 1.6 0.0016 P8 Cb GC GTGGAGCCGC (2) 1.6 0.0016 Cb medulloblastoma GTGGAGCCGC (2) 2.3 0.0023 P8 GC+1d culture TTTTGAGCAA (2) 2.3 0.0023 P8 GC+1d culture AACAAAGGAC (4) 1.1 0.0011 P8 GC+1d culture AAGCAGCTGG (14) 1.1 0.0011 P8 GC+1d culture GTGGAGCCGC (2) 1.1 0.0011 P8 GC+SHH+1d culture TTTTGAGCAA (2) 4.7 0.0047 P8 GC+SHH+1d culture GTGGAGCCGC (2) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 E15 cortex GCAGCATCCA (7) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 Hypothalamus GCAGCATCCA (7) 3.6 0.0036 Hypothalamus AAGCAGCTGG (14) 1.8 0.0018 Hypothalamus GTCAGAGAGT (2) 1.8 0.0018 E12.5 retina GCAGCATCCA (7) 1.9 0.0019 E12.5 retina GTGGAGCCGC (2) 1.9 0.0019 E14.5 retina GCAGCATCCA (7) 10.9 0.0109 E14.5 retina ATTCCCAATA (2) 3.6 0.0036 E14.5 retina TTTTGAGCAA (2) 3.6 0.0036 E14.5 retina GTCAGAGAGT (2) 1.8 0.0018 E16.5 retina GCAGCATCCA (7) 5.4 0.0054 E16.5 retina GTCAGAGAGT (2) 3.6 0.0036 E16.5 retina TTTTGAGCAA (2) 1.8 0.0018 E18.5 retina GTCAGAGAGT (2) 3.6 0.0036 E18.5 retina TTTTGAGCAA (2) 3.6 0.0036 E18.5 retina GCAGCATCCA (7) 1.8 0.0018 P0.5 retina TTTTGAGCAA (2) 9.8 0.0098 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina ATTCCCAATA (2) 2 0.002 P0.5 retina GCAGCATCCA (7) 2 0.002 P0.5 retina GTCAGAGAGT (2) 2 0.002 P2.5 retina AAGCAGCTGG (14) 3.5 0.0035 P2.5 retina TTTTGAGCAA (2) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina TTTTGAGCAA (2) 9.9 0.0099 P4.5 retina GCAGCATCCA (7) 4 0.004 P4.5 retina AAGCAGCTGG (14) 2 0.002 P4.5 retina ATTCCCAATA (2) 2 0.002 P4.5 retina GTCAGAGAGT (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGGAGCCGC (2) 2 0.002 P6.5 retina TTTTGAGCAA (2) 5 0.005 P6.5 retina GTCAGAGAGT (2) 3.3 0.0033 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina AAGCAGCTGG (14) 1.7 0.0017 P10.5 crx- retina GCAGCATCCA (7) 7.4 0.0074 P10.5 crx- retina ATTCCCAATA (2) 1.9 0.0019 P10.5 crx- retina TTTTGAGCAA (2) 1.9 0.0019 P10.5 crx+ retina TTTTGAGCAA (2) 5.8 0.0058 P10.5 crx+ retina GCAGCATCCA (7) 3.8 0.0038 Adult retinal TTTTGAGCAA (2) 3.7 0.0037 Adult retinal GTCAGAGAGT (2) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 Adult retinal GTGGAGCCGC (2) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL AACAAAGGAC (4) 3.8 0.0038 ONL GCAGCATCCA (7) 1.9 0.0019