Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200859	2610005M20Rik	RIKEN cDNA 2610005M20 gene	9		70308
Mm.200859	Pafah1b2	platelet-activating factor acetylhydrolase, isoform 1b, alpha2 subunit	9		18475
Gene Ontology	1-alkyl-2-acetylglycerophosphocholine esterase activity | catalytic activity | cytoplasm | hydrolase activity | lipid catabolism | spermatogenesis | spermatogenesis
Human Homolog	PAFAH1B2[platelet-activating factor acetylhydrolase, isoform Ib, beta subunit 30kDa]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 99 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CAAAAAAAAA (157) 47.3 0.0473 P8 Cb GC CTTGTCACTC (4) 9.8 0.0098 P8 Cb GC GCCAGTTCTT (6) 3.3 0.0033 P8 Cb GC CACTGCCGTC (3) 1.6 0.0016 P8 Cb GC CTACGGGAGT (3) 1.6 0.0016 P8 Cb GC GTTTTAAAAA (22) 1.6 0.0016 Cb medulloblastoma CAAAAAAAAA (157) 92.5 0.0925 Cb medulloblastoma CTTGTCACTC (4) 4.6 0.0046 Cb medulloblastoma GTTTTAAAAA (22) 4.6 0.0046 P8 GC+1d culture CAAAAAAAAA (157) 37.7 0.0377 P8 GC+1d culture CTTGTCACTC (4) 9.1 0.0091 P8 GC+1d culture GCCAGTTCTT (6) 5.7 0.0057 P8 GC+1d culture GGAAACAGGG (2) 1.1 0.0011 P8 GC+1d culture GTCAGTTCTT (3) 1.1 0.0011 P8 GC+1d culture GTTTTAAAAA (22) 1.1 0.0011 P8 GC+1d culture TCTTCATTAG (2) 1.1 0.0011 P8 GC+SHH+1d culture CAAAAAAAAA (157) 58.5 0.0585 P8 GC+SHH+1d culture CTTGTCACTC (4) 11.7 0.0117 P8 GC+SHH+1d culture GTTTTAAAAA (22) 8.2 0.0082 P8 GC+SHH+1d culture GGAAACAGGG (2) 2.3 0.0023 P8 GC+SHH+1d culture CACTGCCGTC (3) 1.2 0.0012 P8 GC+SHH+1d culture GCCAGTTCTT (6) 1.2 0.0012 P8 GC+SHH+1d culture TCTTCATTAG (2) 1.2 0.0012 3T3 fibroblasts CACTGCCGTC (3) 3.5 0.0035 3T3 fibroblasts CTACGGGAGT (3) 3.5 0.0035 3T3 fibroblasts CTTGTCACTC (4) 3.5 0.0035 E15 cortex CAAAAAAAAA (157) 34.6 0.0346 E15 cortex GCCAGTTCTT (6) 14.8 0.0148 E15 cortex CAGTTGCTGG (10) 4.9 0.0049 E15 cortex CTTGTCACTC (4) 4.9 0.0049 E15 cortex GGAAACAGGG (2) 4.9 0.0049 E15 cortex GTCAGTTCTT (3) 4.9 0.0049 E15 cortex GTTTTAAAAA (22) 4.9 0.0049 P1 cortex CAAAAAAAAA (157) 22.7 0.0227 P1 cortex GCCAGTTCTT (6) 13.6 0.0136 P1 cortex GGAAACAGGG (2) 9.1 0.0091 P1 cortex GTCAGTTCTT (3) 4.5 0.0045 Hypothalamus CAAAAAAAAA (157) 39.8 0.0398 Hypothalamus CTTGTCACTC (4) 7.2 0.0072 Hypothalamus CACTGCCGTC (3) 3.6 0.0036 Hypothalamus GCCAGTTCTT (6) 3.6 0.0036 Hypothalamus GGAAACAGGG (2) 3.6 0.0036 Hypothalamus CAGTTGCTGG (10) 1.8 0.0018 Hypothalamus CTACGGGAGT (3) 1.8 0.0018 E12.5 retina CAAAAAAAAA (157) 22.5 0.0225 E12.5 retina CTTGTCACTC (4) 3.8 0.0038 E12.5 retina GTTTTAAAAA (22) 3.8 0.0038 E12.5 retina GGAAACAGGG (2) 1.9 0.0019 E12.5 retina GTGGCACAGA (6) 1.9 0.0019 E14.5 retina CAAAAAAAAA (157) 9.1 0.0091 E14.5 retina GTTTTAAAAA (22) 9.1 0.0091 E14.5 retina CTTGTCACTC (4) 1.8 0.0018 E14.5 retina GGAAACAGGG (2) 1.8 0.0018 E14.5 retina GTGGCACAGA (6) 1.8 0.0018 E14.5 retina TCTTCATTAG (2) 1.8 0.0018 E16.5 retina CAAAAAAAAA (157) 9.1 0.0091 E16.5 retina GTTTTAAAAA (22) 7.2 0.0072 E16.5 retina CTTGTCACTC (4) 5.4 0.0054 E16.5 retina CAGTTGCTGG (10) 1.8 0.0018 E18.5 retina CAAAAAAAAA (157) 41.8 0.0418 E18.5 retina GTTTTAAAAA (22) 25.5 0.0255 E18.5 retina CTTGTCACTC (4) 5.5 0.0055 E18.5 retina GCCAGTTCTT (6) 1.8 0.0018 E18.5 retina GTCAGTTCTT (3) 1.8 0.0018 P0.5 retina CAAAAAAAAA (157) 137.4 0.1374 P0.5 retina GCCAGTTCTT (6) 11.8 0.0118 P0.5 retina CACTGCCGTC (3) 2 0.002 P2.5 retina CAAAAAAAAA (157) 52.8 0.0528 P2.5 retina CTTGTCACTC (4) 7 0.007 P2.5 retina GTGGCACAGA (6) 1.8 0.0018 P2.5 retina GTTTTAAAAA (22) 1.8 0.0018 P4.5 retina CAAAAAAAAA (157) 41.6 0.0416 P4.5 retina CTTGTCACTC (4) 9.9 0.0099 P4.5 retina GTTTTAAAAA (22) 5.9 0.0059 P4.5 retina GGAAACAGGG (2) 4 0.004 P4.5 retina CTACGGGAGT (3) 2 0.002 P4.5 retina GCCAGTTCTT (6) 2 0.002 P6.5 retina CAAAAAAAAA (157) 31.7 0.0317 P6.5 retina CTTGTCACTC (4) 3.3 0.0033 P6.5 retina CAGTTGCTGG (10) 1.7 0.0017 P6.5 retina GCCAGTTCTT (6) 1.7 0.0017 P6.5 retina GGAAACAGGG (2) 1.7 0.0017 P6.5 retina GTGGCACAGA (6) 1.7 0.0017 P6.5 retina GTTTTAAAAA (22) 1.7 0.0017 P10.5 crx- retina CAAAAAAAAA (157) 13 0.013 P10.5 crx- retina CTTGTCACTC (4) 5.6 0.0056 P10.5 crx- retina CAGTTGCTGG (10) 1.9 0.0019 P10.5 crx- retina GCCAGTTCTT (6) 1.9 0.0019 P10.5 crx+ retina CAAAAAAAAA (157) 32.7 0.0327 P10.5 crx+ retina CTTGTCACTC (4) 9.6 0.0096 P10.5 crx+ retina GTGGCACAGA (6) 3.8 0.0038 P10.5 crx+ retina CACTGCCGTC (3) 1.9 0.0019 Adult retinal CAAAAAAAAA (157) 20.4 0.0204 Adult retinal GCCAGTTCTT (6) 11.1 0.0111 Adult retinal CTTGTCACTC (4) 1.9 0.0019 Adult retinal GTGGCACAGA (6) 1.9 0.0019 Adult retinal TCTTCATTAG (2) 1.9 0.0019 ONL CAAAAAAAAA (157) 17.2 0.0172 ONL GTTTTAAAAA (22) 3.8 0.0038