Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.200898	B230112G18Rik	RIKEN cDNA B230112G18 gene	8		77842
Mm.200898	AU041707	expressed sequence AU041707	8		102247
Gene Ontology	acyltransferase activity | integral to membrane | metabolism | transferase activity
Human Homolog	DKFZp586M1819[putative lysophosphatidic acid acyltransferase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 112 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GCAGCTCACA (24) 8.2 0.0082 P8 Cb GC GAATTGCGGA (2) 6.5 0.0065 P8 Cb GC GATGATGAAG (5) 4.9 0.0049 P8 Cb GC TGGGTGCTAG (16) 3.3 0.0033 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GCAGCTCACA (24) 6.9 0.0069 Cb medulloblastoma GAATTGCGGA (2) 4.6 0.0046 Cb medulloblastoma GGGGGAGGGG (18) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GCAGCTCACA (24) 10.3 0.0103 P8 GC+1d culture GGGGGAGGGG (18) 2.3 0.0023 P8 GC+1d culture GAATTGCGGA (2) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GCAGCTCACA (24) 10.5 0.0105 P8 GC+SHH+1d culture GATGATGAAG (5) 3.5 0.0035 P8 GC+SHH+1d culture GAATTGCGGA (2) 1.2 0.0012 P8 GC+SHH+1d culture GGAAGTCAGG (4) 1.2 0.0012 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GAATTGCGGA (2) 14 0.014 3T3 fibroblasts GCAGCTCACA (24) 14 0.014 3T3 fibroblasts GGGGGAGGGG (18) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GCAGCTCACA (24) 24.7 0.0247 E15 cortex TGGGTGCTAG (16) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GAATTGCGGA (2) 4.5 0.0045 P1 cortex GCAGCTCACA (24) 4.5 0.0045 P1 cortex GGGGGAGGGG (18) 4.5 0.0045 P1 cortex TCCAGGATAA (3) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GATGATGAAG (5) 5.4 0.0054 Hypothalamus GCAGCTCACA (24) 5.4 0.0054 Hypothalamus GAATTGCGGA (2) 1.8 0.0018 Hypothalamus TCCAGGATAA (3) 1.8 0.0018 Hypothalamus TGGGTGCTAG (16) 1.8 0.0018 Hypothalamus TGTATATGTG (10) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GAATTGCGGA (2) 13.1 0.0131 E12.5 retina GATGATGAAG (5) 11.3 0.0113 E12.5 retina GCAGCTCACA (24) 9.4 0.0094 E12.5 retina GGGGGAGGGG (18) 3.8 0.0038 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GCAGCTCACA (24) 40.1 0.0401 E14.5 retina TCCAGGATAA (3) 3.6 0.0036 E14.5 retina TGGGTGCTAG (16) 3.6 0.0036 E14.5 retina GAATTGCGGA (2) 1.8 0.0018 E14.5 retina GATGATGAAG (5) 1.8 0.0018 E14.5 retina GGAACCAAGC (3) 1.8 0.0018 E14.5 retina TGGGGGATTC (3) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GCAGCTCACA (24) 23.5 0.0235 E16.5 retina GAATTGCGGA (2) 3.6 0.0036 E16.5 retina GATGATGAAG (5) 1.8 0.0018 E16.5 retina TGTATATGTG (10) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GCAGCTCACA (24) 14.6 0.0146 E18.5 retina GAATTGCGGA (2) 5.5 0.0055 E18.5 retina TGGGGGATTC (3) 3.6 0.0036 E18.5 retina GATGATGAAG (5) 1.8 0.0018 E18.5 retina GGGGGAGGGG (18) 1.8 0.0018 E18.5 retina TGTATATGTG (10) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina GCAGCTCACA (24) 15.7 0.0157 P0.5 retina GATGATGAAG (5) 3.9 0.0039 P0.5 retina GGAACCAAGC (3) 3.9 0.0039 P0.5 retina GAATTGCGGA (2) 2 0.002 P0.5 retina GGAAGTCAGG (4) 2 0.002 P0.5 retina TGTATATGTG (10) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GAATTGCGGA (2) 8.8 0.0088 P2.5 retina GCAGCTCACA (24) 7 0.007 P2.5 retina TGGGTGCTAG (16) 7 0.007 P2.5 retina TGTATATGTG (10) 5.3 0.0053 P2.5 retina GGAAGTCAGG (4) 1.8 0.0018 P2.5 retina GGGGGAGGGG (18) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GAATTGCGGA (2) 7.9 0.0079 P4.5 retina GCAGCTCACA (24) 5.9 0.0059 P4.5 retina GATGATGAAG (5) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GCAGCTCACA (24) 15 0.015 P6.5 retina TGTATATGTG (10) 3.3 0.0033 P6.5 retina GAATTGCGGA (2) 1.7 0.0017 P6.5 retina GATGATGAAG (5) 1.7 0.0017 P6.5 retina GGGGGAGGGG (18) 1.7 0.0017 P6.5 retina TCCAGGATAA (3) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GCAGCTCACA (24) 24.2 0.0242 P10.5 crx- retina GAATTGCGGA (2) 18.6 0.0186 P10.5 crx- retina TGTATATGTG (10) 3.7 0.0037 P10.5 crx- retina GATGATGAAG (5) 1.9 0.0019 P10.5 crx- retina GGAAGTCAGG (4) 1.9 0.0019 P10.5 crx- retina GGGGGAGGGG (18) 1.9 0.0019 P10.5 crx- retina TGGGTGCTAG (16) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GCAGCTCACA (24) 17.3 0.0173 P10.5 crx+ retina TGGGTGCTAG (16) 5.8 0.0058 P10.5 crx+ retina GAATTGCGGA (2) 3.8 0.0038 P10.5 crx+ retina GGGGGAGGGG (18) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GCAGCTCACA (24) 18.5 0.0185 Adult retinal GAATTGCGGA (2) 3.7 0.0037 Adult retinal GGGGGAGGGG (18) 1.9 0.0019 Adult retinal TGGGTGCTAG (16) 1.9 0.0019 Adult retinal TGTATATGTG (10) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GCAGCTCACA (24) 7.7 0.0077 ONL GAATTGCGGA (2) 3.8 0.0038 ONL TGGGTGCTAG (16) 3.8 0.0038 ONL TGTATATGTG (10) 3.8 0.0038 ONL GATGATGAAG (5) 1.9 0.0019