Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20348	Nid2	nidogen 2	14		18074
Gene Ontology	basement membrane | calcium ion binding | cell adhesion | cell-matrix adhesion | cell-matrix adhesion | extracellular matrix | extracellular space | membrane | protein binding
Human Homolog	NID2[nidogen 2 (osteonidogen)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 63 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GCAAAAAAAA (50) 14.7 0.0147 P8 Cb GC GGAAAAAAAA (69) 8.2 0.0082 P8 Cb GC GGGTTGGCCC (2) 4.9 0.0049 P8 Cb GC GCAAACAAAA (8) 3.3 0.0033 P8 Cb GC GGAAACAAAA (11) 1.6 0.0016 P8 Cb GC GGAAAGAAGA (12) 1.6 0.0016 Cb medulloblastoma GCAAAAAAAA (50) 60.1 0.0601 Cb medulloblastoma GGAAAAAAAA (69) 41.6 0.0416 Cb medulloblastoma GCAAACAAAA (8) 2.3 0.0023 Cb medulloblastoma GGAAACAAAA (11) 2.3 0.0023 P8 GC+1d culture GCAAAAAAAA (50) 12.6 0.0126 P8 GC+1d culture GGAAAAAAAA (69) 5.7 0.0057 P8 GC+1d culture GGGTTGGCCC (2) 1.1 0.0011 P8 GC+SHH+1d culture GCAAAAAAAA (50) 29.3 0.0293 P8 GC+SHH+1d culture GGAAAAAAAA (69) 7 0.007 P8 GC+SHH+1d culture GCAAACAAAA (8) 1.2 0.0012 3T3 fibroblasts CTGAGCCTGA (7) 3.5 0.0035 3T3 fibroblasts GCAAAAAAAA (50) 3.5 0.0035 E15 cortex GCAAAAAAAA (50) 9.9 0.0099 E15 cortex GGAAAAAAAA (69) 9.9 0.0099 E15 cortex GGAAAGAAGA (12) 9.9 0.0099 P1 cortex GCAAAAAAAA (50) 4.5 0.0045 P1 cortex GGAAAAAAAA (69) 4.5 0.0045 P1 cortex GGAAACAAAA (11) 4.5 0.0045 Hypothalamus GCAAAAAAAA (50) 19.9 0.0199 Hypothalamus GGAAAAAAAA (69) 14.5 0.0145 Hypothalamus CTGAGCCTGA (7) 1.8 0.0018 E12.5 retina GCAAAAAAAA (50) 9.4 0.0094 E12.5 retina GGAAAAAAAA (69) 1.9 0.0019 E12.5 retina TGTTTCCTCA (3) 1.9 0.0019 E14.5 retina GCAAAAAAAA (50) 12.8 0.0128 E14.5 retina GGAAAAAAAA (69) 10.9 0.0109 E14.5 retina AAAGTTGTTG 1.8 0.0018 E16.5 retina GCAAAAAAAA (50) 10.9 0.0109 E16.5 retina GGAAAAAAAA (69) 1.8 0.0018 E16.5 retina GGAAACAAAA (11) 1.8 0.0018 E18.5 retina GCAAAAAAAA (50) 25.5 0.0255 E18.5 retina GGAAAAAAAA (69) 16.4 0.0164 E18.5 retina GGAAACAAAA (11) 3.6 0.0036 P0.5 retina GCAAAAAAAA (50) 17.7 0.0177 P0.5 retina GGAAAAAAAA (69) 13.7 0.0137 P0.5 retina CTGAGCCTGA (7) 2 0.002 P2.5 retina GCAAAAAAAA (50) 22.9 0.0229 P2.5 retina GGAAAAAAAA (69) 7 0.007 P2.5 retina AAAGTTGTTG 1.8 0.0018 P2.5 retina GCAAACAAAA (8) 1.8 0.0018 P4.5 retina GCAAAAAAAA (50) 25.8 0.0258 P4.5 retina GGAAAAAAAA (69) 13.9 0.0139 P4.5 retina GCAAACAAAA (8) 4 0.004 P4.5 retina AAAGTTGTTG 2 0.002 P6.5 retina GGAAAAAAAA (69) 13.3 0.0133 P6.5 retina GCAAAAAAAA (50) 11.7 0.0117 P6.5 retina GGAAAGAAGA (12) 1.7 0.0017 P10.5 crx- retina GCAAAAAAAA (50) 5.6 0.0056 P10.5 crx- retina GGAAAAAAAA (69) 3.7 0.0037 P10.5 crx+ retina GGAAAAAAAA (69) 15.4 0.0154 P10.5 crx+ retina GCAAAAAAAA (50) 1.9 0.0019 P10.5 crx+ retina GGGTTGGCCC (2) 1.9 0.0019 Adult retinal GCAAAAAAAA (50) 11.1 0.0111 Adult retinal GGAAAAAAAA (69) 5.6 0.0056 ONL GGAAAAAAAA (69) 17.2 0.0172 ONL TGTTTCCTCA (3) 3.8 0.0038 ONL GCAAAAAAAA (50) 1.9 0.0019