Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2041	Muc2	mucin 2	7	7 68.99 cM	17831
Mm.2041	Muc5ac	mucin 5, subtypes A and C, tracheobronchial/gastric	7	7 69.0 cM	17833
Gene Ontology	protein binding
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 128 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGCACCTG (8) 3.3 0.0033 P8 Cb GC GATTTTATGA (3) 1.6 0.0016 P8 Cb GC GTTTGTTTGG (6) 1.6 0.0016 P8 Cb GC TACTCTGCTC (2) 1.6 0.0016 P8 Cb GC TGAACTGTAA (3) 1.6 0.0016 P8 Cb GC TTCTCTGCCA (6) 1.6 0.0016 Cb medulloblastoma AGCAAAAAAA (12) 23.1 0.0231 Cb medulloblastoma TGAACTGTAA (3) 6.9 0.0069 Cb medulloblastoma GGGAGAAAAA (11) 4.6 0.0046 Cb medulloblastoma CCCACCTCCT (6) 2.3 0.0023 Cb medulloblastoma GATTTTATGA (3) 2.3 0.0023 Cb medulloblastoma GCCCAAAAAA (7) 2.3 0.0023 P8 GC+1d culture GATTTTATGA (3) 6.8 0.0068 P8 GC+1d culture CCCACCTCCT (6) 2.3 0.0023 P8 GC+1d culture GGGAGAAAAA (11) 2.3 0.0023 P8 GC+1d culture AGCAAAAAAA (12) 1.1 0.0011 P8 GC+1d culture CCTACACACA (5) 1.1 0.0011 P8 GC+1d culture GGGGCACCTG (8) 1.1 0.0011 P8 GC+1d culture GTTTGTTTGG (6) 1.1 0.0011 P8 GC+1d culture TGAACTGTAA (3) 1.1 0.0011 P8 GC+1d culture TGCCTCAAAA (4) 1.1 0.0011 P8 GC+SHH+1d culture AGCAAAAAAA (12) 5.9 0.0059 P8 GC+SHH+1d culture GATTTTATGA (3) 4.7 0.0047 P8 GC+SHH+1d culture TGAACTGTAA (3) 4.7 0.0047 P8 GC+SHH+1d culture GACCACAAAA (3) 1.2 0.0012 P8 GC+SHH+1d culture GGGAGAAAAA (11) 1.2 0.0012 P8 GC+SHH+1d culture GTTTGTTTGG (6) 1.2 0.0012 P8 GC+SHH+1d culture TACTCTGCTC (2) 1.2 0.0012 P8 GC+SHH+1d culture TTCTCTGCCA (6) 1.2 0.0012 3T3 fibroblasts GGGGCACCTG (8) 10.5 0.0105 E15 cortex GGGGCACCTG (8) 9.9 0.0099 E15 cortex AGCAAAAAAA (12) 4.9 0.0049 P1 cortex GATTTTATGA (3) 9.1 0.0091 P1 cortex ACTAGGTTGG (2) 4.5 0.0045 P1 cortex GGGGCACCTG (8) 4.5 0.0045 P1 cortex TGAACTGTAA (3) 4.5 0.0045 P1 cortex TGCCTCAAAA (4) 4.5 0.0045 Hypothalamus AGCAAAAAAA (12) 5.4 0.0054 Hypothalamus TAAGTGTGAC (2) 3.6 0.0036 Hypothalamus ACTAGGTTGG (2) 1.8 0.0018 Hypothalamus CCTACACACA (5) 1.8 0.0018 Hypothalamus GATTTTATGA (3) 1.8 0.0018 Hypothalamus TGAACTGTAA (3) 1.8 0.0018 E12.5 retina GATTTTATGA (3) 13.1 0.0131 E12.5 retina TGAACTGTAA (3) 3.8 0.0038 E12.5 retina AAAACTCACC (5) 1.9 0.0019 E12.5 retina ACTAGGTTGG (2) 1.9 0.0019 E12.5 retina CCTACACACA (5) 1.9 0.0019 E12.5 retina GGGAGAAAAA (11) 1.9 0.0019 E14.5 retina GATTTTATGA (3) 12.8 0.0128 E14.5 retina TGAACTGTAA (3) 7.3 0.0073 E14.5 retina TAAGTGTGAC (2) 3.6 0.0036 E14.5 retina TACTCTGCTC (2) 3.6 0.0036 E14.5 retina AGCAAAAAAA (12) 1.8 0.0018 E14.5 retina CCTACACACA (5) 1.8 0.0018 E14.5 retina GGGAGAAAAA (11) 1.8 0.0018 E14.5 retina TGTGGAAAAA (5) 1.8 0.0018 E16.5 retina GATTTTATGA (3) 10.9 0.0109 E16.5 retina CCCACCTCCT (6) 7.2 0.0072 E16.5 retina GTGGCACTGG (5) 3.6 0.0036 E16.5 retina ACAAGGTGTC (2) 1.8 0.0018 E16.5 retina GGGAGAAAAA (11) 1.8 0.0018 E18.5 retina GATTTTATGA (3) 10.9 0.0109 E18.5 retina AGCAAAAAAA (12) 9.1 0.0091 E18.5 retina GCCCAAAAAA (7) 1.8 0.0018 E18.5 retina GGGGCACCTG (8) 1.8 0.0018 E18.5 retina GTGGCACTGG (5) 1.8 0.0018 E18.5 retina TGTGGAAAAA (5) 1.8 0.0018 P0.5 retina GATTTTATGA (3) 9.8 0.0098 P0.5 retina GACCACAAAA (3) 5.9 0.0059 P0.5 retina GTTTGTTTGG (6) 3.9 0.0039 P0.5 retina AAAACTCACC (5) 2 0.002 P0.5 retina ACTAGGTTGG (2) 2 0.002 P0.5 retina CCCACCTCCT (6) 2 0.002 P0.5 retina GCCCAAAAAA (7) 2 0.002 P0.5 retina GGGGCACCTG (8) 2 0.002 P2.5 retina GATTTTATGA (3) 14.1 0.0141 P2.5 retina AGCAAAAAAA (12) 8.8 0.0088 P2.5 retina CCTACACACA (5) 1.8 0.0018 P2.5 retina GACCACAAAA (3) 1.8 0.0018 P2.5 retina GGGGCACCTG (8) 1.8 0.0018 P2.5 retina GTTTGTTTGG (6) 1.8 0.0018 P2.5 retina TGTGGAAAAA (5) 1.8 0.0018 P2.5 retina TTCTCTGCCA (6) 1.8 0.0018 P4.5 retina GATTTTATGA (3) 13.9 0.0139 P4.5 retina AGCAAAAAAA (12) 5.9 0.0059 P4.5 retina GACCACAAAA (3) 5.9 0.0059 P4.5 retina TGTGGAAAAA (5) 4 0.004 P4.5 retina CCTACACACA (5) 2 0.002 P4.5 retina GTTTGTTTGG (6) 2 0.002 P4.5 retina TGAACTGTAA (3) 2 0.002 P4.5 retina TGCCTCAAAA (4) 2 0.002 P4.5 retina TTCTCTGCCA (6) 2 0.002 P6.5 retina GACCACAAAA (3) 15 0.015 P6.5 retina GATTTTATGA (3) 10 0.01 P6.5 retina AGCAAAAAAA (12) 6.7 0.0067 P6.5 retina GTTTGTTTGG (6) 3.3 0.0033 P6.5 retina CCCACCTCCT (6) 1.7 0.0017 P6.5 retina GGGGCACCTG (8) 1.7 0.0017 P6.5 retina GTGGCACTGG (5) 1.7 0.0017 P6.5 retina TTCTCTGCCA (6) 1.7 0.0017 P10.5 crx- retina GACCACAAAA (3) 9.3 0.0093 P10.5 crx- retina GATTTTATGA (3) 9.3 0.0093 P10.5 crx- retina AAAACTCACC (5) 1.9 0.0019 P10.5 crx- retina AAACTGAAAG (13) 1.9 0.0019 P10.5 crx- retina ACAAGGTGTC (2) 1.9 0.0019 P10.5 crx- retina CCTACACACA (5) 1.9 0.0019 P10.5 crx+ retina GATTTTATGA (3) 15.4 0.0154 P10.5 crx+ retina GACCACAAAA (3) 13.5 0.0135 P10.5 crx+ retina AGCAAAAAAA (12) 7.7 0.0077 P10.5 crx+ retina TAAGTGTGAC (2) 3.8 0.0038 P10.5 crx+ retina CCTACACACA (5) 1.9 0.0019 P10.5 crx+ retina TGCCTCAAAA (4) 1.9 0.0019 Adult retinal GACCACAAAA (3) 14.8 0.0148 Adult retinal AAGGACATTT (3) 5.6 0.0056 Adult retinal GATTTTATGA (3) 5.6 0.0056 Adult retinal ACAAGGTGTC (2) 3.7 0.0037 Adult retinal AAACTGAAAG (13) 1.9 0.0019 Adult retinal GCCCAAAAAA (7) 1.9 0.0019 Adult retinal TAAGTGTGAC (2) 1.9 0.0019 Adult retinal TGAACTGTAA (3) 1.9 0.0019 ONL GACCACAAAA (3) 23 0.023 ONL GATTTTATGA (3) 13.4 0.0134 ONL ACAAGGTGTC (2) 3.8 0.0038 ONL AAACTGAAAG (13) 1.9 0.0019 ONL AGCAAAAAAA (12) 1.9 0.0019 ONL GGGAGAAAAA (11) 1.9 0.0019 ONL GTTTGTTTGG (6) 1.9 0.0019