Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.204670	Txndc1	thioredoxin domain containing 1	12		72736
Gene Ontology	electron transport | electron transporter activity | extracellular space | integral to membrane
Human Homolog	TXNDC[thioredoxin domain containing]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 55 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTCCCTGTTG (7) 4.9 0.0049 P8 Cb GC GGGGCAGGGA (4) 1.6 0.0016 Cb medulloblastoma CTCCCTGTTG (7) 4.6 0.0046 Cb medulloblastoma GGGGCAGGGA (4) 2.3 0.0023 P8 GC+1d culture CTCCCTGTTG (7) 4.6 0.0046 P8 GC+1d culture GGGGCAGGGA (4) 1.1 0.0011 P8 GC+SHH+1d culture CTCCCTGTTG (7) 5.9 0.0059 P8 GC+SHH+1d culture GGGGCAGGGA (4) 4.7 0.0047 P8 GC+SHH+1d culture CCCAGCAAGC (5) 1.2 0.0012 P8 GC+SHH+1d culture TAGTCCTTTT (2) 1.2 0.0012 P8 GC+SHH+1d culture TCAGGAGAAT (2) 1.2 0.0012 3T3 fibroblasts CTCCCTGTTG (7) 10.5 0.0105 3T3 fibroblasts CAGGAGGGCC (4) 3.5 0.0035 3T3 fibroblasts GGGGCAGGGA (4) 3.5 0.0035 E15 cortex GGGGCAGGGA (4) 9.9 0.0099 P1 cortex TCAGGAGAAT (2) 4.5 0.0045 Hypothalamus CCCAGCAAGC (5) 1.8 0.0018 Hypothalamus TCAGGAGAAT (2) 1.8 0.0018 E12.5 retina CTCCCTGTTG (7) 13.1 0.0131 E12.5 retina GGGGCAGGGA (4) 1.9 0.0019 E12.5 retina TAGTCCTTTT (2) 1.9 0.0019 E14.5 retina CTCCCTGTTG (7) 3.6 0.0036 E14.5 retina TAGTCCTTTT (2) 1.8 0.0018 E16.5 retina GGGGCAGGGA (4) 5.4 0.0054 E16.5 retina CTCCCTGTTG (7) 3.6 0.0036 E16.5 retina TCAGGAGAAT (2) 1.8 0.0018 E18.5 retina GGGGCAGGGA (4) 3.6 0.0036 E18.5 retina CCCAGCAAGC (5) 1.8 0.0018 E18.5 retina CTCCCTGTTG (7) 1.8 0.0018 P0.5 retina GGGGCAGGGA (4) 7.9 0.0079 P0.5 retina CTCCCTGTTG (7) 2 0.002 P2.5 retina GGGGCAGGGA (4) 5.3 0.0053 P2.5 retina CTCCCTGTTG (7) 3.5 0.0035 P2.5 retina TAGTCCTTTT (2) 1.8 0.0018 P2.5 retina TCAGGAGAAT (2) 1.8 0.0018 P4.5 retina GGGGCAGGGA (4) 7.9 0.0079 P4.5 retina CAGGAGGGCC (4) 2 0.002 P4.5 retina CTCCCTGTTG (7) 2 0.002 P4.5 retina TAGTCCTTTT (2) 2 0.002 P6.5 retina GGGGCAGGGA (4) 13.3 0.0133 P6.5 retina CTCCCTGTTG (7) 5 0.005 P6.5 retina TAGTCCTTTT (2) 3.3 0.0033 P6.5 retina TCAGGAGAAT (2) 3.3 0.0033 P6.5 retina CAGGAGGGCC (4) 1.7 0.0017 P10.5 crx- retina GGGGCAGGGA (4) 3.7 0.0037 P10.5 crx- retina CTCCCTGTTG (7) 1.9 0.0019 P10.5 crx- retina TCAGGAGAAT (2) 1.9 0.0019 P10.5 crx+ retina GGGGCAGGGA (4) 13.5 0.0135 P10.5 crx+ retina CTCCCTGTTG (7) 1.9 0.0019 P10.5 crx+ retina TCAGGAGAAT (2) 1.9 0.0019 Adult retinal GGGGCAGGGA (4) 14.8 0.0148 Adult retinal TAGTCCTTTT (2) 3.7 0.0037 Adult retinal CAGGAGGGCC (4) 1.9 0.0019 Adult retinal TCAGGAGAAT (2) 1.9 0.0019 ONL TAGTCCTTTT (2) 1.9 0.0019