Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.204834	E130014H10Rik	RIKEN cDNA E130014H10 gene	15		319608
Mm.204834	Slc1a3	solute carrier family 1 (glial high affinity glutamate transporter), member 3	15	15 6.7 cM	20512
Gene Ontology	carrier activity | carrier activity | dicarboxylic acid transport | integral to membrane | integral to plasma membrane | integral to plasma membrane | membrane | organic acid:sodium symporter activity | protein targeting | sodium:dicarboxylate symporter activity | symporter activity | transport | transport
Human Homolog	SLC1A3[solute carrier family 1 (glial high affinity glutamate transporter), member 3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 52 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGACCCTCCT (3) 16.3 0.0163 P8 Cb GC AGGATCTCAG (3) 8.2 0.0082 P8 Cb GC TATAGAAAGG (2) 4.9 0.0049 P8 Cb GC TCCATCCGAA (4) 1.6 0.0016 Cb medulloblastoma AGACCCTCCT (3) 11.6 0.0116 Cb medulloblastoma TATAGAAAGG (2) 9.2 0.0092 Cb medulloblastoma AGGATCTCAG (3) 4.6 0.0046 Cb medulloblastoma AACTGAAGAA (5) 2.3 0.0023 Cb medulloblastoma GAGACTCTGA (7) 2.3 0.0023 Cb medulloblastoma TTATTTTCAA (5) 2.3 0.0023 P8 GC+1d culture AGACCCTCCT (3) 3.4 0.0034 P8 GC+1d culture AGGATCTCAG (3) 2.3 0.0023 P8 GC+1d culture TATAGAAAGG (2) 2.3 0.0023 P8 GC+1d culture TCCATCCGAA (4) 1.1 0.0011 P8 GC+SHH+1d culture AGACCCTCCT (3) 15.2 0.0152 P8 GC+SHH+1d culture TATAGAAAGG (2) 3.5 0.0035 3T3 fibroblasts GAGACTCTGA (7) 3.5 0.0035 P1 cortex AGGATCTCAG (3) 9.1 0.0091 Hypothalamus AGGATCTCAG (3) 3.6 0.0036 Hypothalamus TATAGAAAGG (2) 3.6 0.0036 Hypothalamus AGACCCTCCT (3) 1.8 0.0018 Hypothalamus GAGACTCTGA (7) 1.8 0.0018 Hypothalamus TTATTTTCAA (5) 1.8 0.0018 E12.5 retina AGACCCTCCT (3) 13.1 0.0131 E14.5 retina AGACCCTCCT (3) 3.6 0.0036 E14.5 retina TATAGAAAGG (2) 1.8 0.0018 E14.5 retina TCCATCCGAA (4) 1.8 0.0018 E16.5 retina AGACCCTCCT (3) 7.2 0.0072 E16.5 retina TATAGAAAGG (2) 7.2 0.0072 E16.5 retina AACTGAAGAA (5) 1.8 0.0018 E16.5 retina GAGACTCTGA (7) 1.8 0.0018 E18.5 retina AGACCCTCCT (3) 5.5 0.0055 P0.5 retina AGACCCTCCT (3) 5.9 0.0059 P0.5 retina TATAGAAAGG (2) 2 0.002 P2.5 retina AGACCCTCCT (3) 12.3 0.0123 P2.5 retina TATAGAAAGG (2) 3.5 0.0035 P4.5 retina AGACCCTCCT (3) 11.9 0.0119 P4.5 retina TATAGAAAGG (2) 2 0.002 P6.5 retina AGACCCTCCT (3) 5 0.005 P6.5 retina AGGATCTCAG (3) 1.7 0.0017 P6.5 retina TATAGAAAGG (2) 1.7 0.0017 P10.5 crx- retina AGACCCTCCT (3) 7.4 0.0074 P10.5 crx- retina TATAGAAAGG (2) 7.4 0.0074 P10.5 crx- retina AGGATCTCAG (3) 1.9 0.0019 P10.5 crx- retina GAGACTCTGA (7) 1.9 0.0019 P10.5 crx+ retina TATAGAAAGG (2) 9.6 0.0096 P10.5 crx+ retina AGACCCTCCT (3) 7.7 0.0077 P10.5 crx+ retina AGGATCTCAG (3) 3.8 0.0038 P10.5 crx+ retina GAGACTCTGA (7) 1.9 0.0019 Adult retinal AGACCCTCCT (3) 1.9 0.0019 ONL AGACCCTCCT (3) 5.7 0.0057 ONL AACTGAAGAA (5) 1.9 0.0019