Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2055	Mmp12	matrix metalloproteinase 12	9	9 1.0 cM	17381
Gene Ontology	calcium ion binding | extracellular matrix | extracellular space | hydrolase activity | macrophage elastase activity | metalloendopeptidase activity | metallopeptidase activity | proteolysis and peptidolysis | zinc ion binding
Human Homolog	MMP12[matrix metalloproteinase 12 (macrophage elastase)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 66 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TCAAGATTTT (2) 4.9 0.0049 P8 Cb GC TAGAGGCCTG (2) 1.6 0.0016 P8 Cb GC TTTGGTTTTC (2) 1.6 0.0016 Cb medulloblastoma TCAAGATTTT (2) 6.9 0.0069 Cb medulloblastoma CTAGATAATT (3) 2.3 0.0023 Cb medulloblastoma GACCCTGCTT (5) 2.3 0.0023 P8 GC+1d culture TTTTGTTTTC (5) 28.5 0.0285 P8 GC+1d culture TCAAGATTTT (2) 4.6 0.0046 P8 GC+1d culture CTTTTATCCT (4) 3.4 0.0034 P8 GC+1d culture TTTGGTTTTC (2) 2.3 0.0023 P8 GC+1d culture GAAAGGACAG (3) 1.1 0.0011 P8 GC+SHH+1d culture TTTTGTTTTC (5) 22.2 0.0222 P8 GC+SHH+1d culture TCAAGATTTT (2) 3.5 0.0035 P8 GC+SHH+1d culture CAGCAGTCCT (5) 1.2 0.0012 3T3 fibroblasts CAGCACCTCT 3.5 0.0035 3T3 fibroblasts CTTTTATCCT (4) 3.5 0.0035 E15 cortex CAGCAGTCCT (5) 4.9 0.0049 E15 cortex TAGAGGCCTG (2) 4.9 0.0049 Hypothalamus TCAAGATTTT (2) 9.1 0.0091 Hypothalamus GAAAGGACAG (3) 1.8 0.0018 E12.5 retina TCAAGATTTT (2) 7.5 0.0075 E12.5 retina CCCTTTCAAA (5) 5.6 0.0056 E12.5 retina TGCTGGGATT (12) 1.9 0.0019 E12.5 retina TTTGGTTTTC (2) 1.9 0.0019 E14.5 retina TCAAGATTTT (2) 12.8 0.0128 E14.5 retina CAGCAGTCCT (5) 3.6 0.0036 E14.5 retina CCCTTTCAAA (5) 3.6 0.0036 E14.5 retina GACCCTGCTT (5) 1.8 0.0018 E16.5 retina TCAAGATTTT (2) 9.1 0.0091 E16.5 retina CAGCACCTCT 1.8 0.0018 E16.5 retina CAGCAGTCCT (5) 1.8 0.0018 E16.5 retina TAGAGGCCTG (2) 1.8 0.0018 E18.5 retina TCAAGATTTT (2) 9.1 0.0091 E18.5 retina TGCTGGGATT (12) 7.3 0.0073 E18.5 retina CAGCAGTCCT (5) 1.8 0.0018 E18.5 retina CTAGATAATT (3) 1.8 0.0018 E18.5 retina GAAAGGACAG (3) 1.8 0.0018 P0.5 retina CAGCAGTCCT (5) 3.9 0.0039 P0.5 retina CTAGATAATT (3) 2 0.002 P2.5 retina TCAAGATTTT (2) 8.8 0.0088 P2.5 retina CCCTTTCAAA (5) 1.8 0.0018 P2.5 retina TGCTGGGATT (12) 1.8 0.0018 P4.5 retina TCAAGATTTT (2) 7.9 0.0079 P4.5 retina CAGCAGTCCT (5) 4 0.004 P4.5 retina CAGCACCTCT 2 0.002 P4.5 retina CCCTTTCAAA (5) 2 0.002 P4.5 retina GAAAGGACAG (3) 2 0.002 P6.5 retina TCAAGATTTT (2) 3.3 0.0033 P6.5 retina CAGCAGTCCT (5) 1.7 0.0017 P6.5 retina GACCCTGCTT (5) 1.7 0.0017 P6.5 retina TGCTGGGATT (12) 1.7 0.0017 P10.5 crx- retina TCAAGATTTT (2) 5.6 0.0056 P10.5 crx- retina GACCCTGCTT (5) 3.7 0.0037 P10.5 crx- retina CAGCAGTCCT (5) 1.9 0.0019 P10.5 crx- retina CTAGATAATT (3) 1.9 0.0019 P10.5 crx- retina TAGAGGCCTG (2) 1.9 0.0019 P10.5 crx+ retina CAGCAGTCCT (5) 1.9 0.0019 P10.5 crx+ retina CTAGATAATT (3) 1.9 0.0019 P10.5 crx+ retina CTTTTATCCT (4) 1.9 0.0019 P10.5 crx+ retina GACCCTGCTT (5) 1.9 0.0019 P10.5 crx+ retina TAGAGGCCTG (2) 1.9 0.0019 Adult retinal TGCTGGGATT (12) 3.7 0.0037 Adult retinal CCCTTTCAAA (5) 1.9 0.0019 Adult retinal TAGAGGCCTG (2) 1.9 0.0019 ONL TGCTGGGATT (12) 3.8 0.0038 ONL CAGCAGTCCT (5) 1.9 0.0019