Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20755	Supt6h	suppressor of Ty 6 homolog (S. cerevisiae)	11	11 44.91 cM	20926
Gene Ontology	hydrolase activity, acting on ester bonds | intracellular signaling cascade | nucleic acid binding | nucleobase, nucleoside, nucleotide and nucleic acid metabolism | nucleus | RNA binding
Human Homolog	SUPT6H[suppressor of Ty 6 homolog (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 97 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TCCATTGCTG (5) 4.9 0.0049 P8 Cb GC TGGAGCAGTG 4.9 0.0049 P8 Cb GC CACCACCACT (20) 1.6 0.0016 P8 Cb GC GAGAGGCTCA (4) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma TCCATTGCTG (5) 6.9 0.0069 Cb medulloblastoma TGGAGCAGTG 6.9 0.0069 Cb medulloblastoma GAGAGGCTCA (4) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TGGAGCAGTG 11.4 0.0114 P8 GC+1d culture CACCACCACT (20) 5.7 0.0057 P8 GC+1d culture AGGGCCTGTC (2) 3.4 0.0034 P8 GC+1d culture TCCATTGCTG (5) 3.4 0.0034 P8 GC+1d culture CTGGCGATGC (2) 2.3 0.0023 P8 GC+1d culture GAGAGGCTCA (4) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture TGGAGCAGTG 7 0.007 P8 GC+SHH+1d culture CTGGCGATGC (2) 3.5 0.0035 P8 GC+SHH+1d culture CACCACCACT (20) 1.2 0.0012 P8 GC+SHH+1d culture GAGAGGCTCA (4) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 3T3 fibroblasts CTGGCGATGC (2) 10.5 0.0105 3T3 fibroblasts GAGAGGCTCA (4) 10.5 0.0105 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex TGGAGCAGTG 9.9 0.0099 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TGGAGCAGTG 9.1 0.0091 P1 cortex CACCACCACT (20) 4.5 0.0045 P1 cortex TCCATTGCTG (5) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus CACCACCACT (20) 5.4 0.0054 Hypothalamus CTGGCGATGC (2) 3.6 0.0036 Hypothalamus TGGAGCAGTG 3.6 0.0036 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CACCACCACT (20) 5.6 0.0056 E12.5 retina CTGGCGATGC (2) 5.6 0.0056 E12.5 retina TCCATTGCTG (5) 3.8 0.0038 E12.5 retina GAGAGGCTCA (4) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TGGAGCAGTG 7.3 0.0073 E14.5 retina CACCACCACT (20) 3.6 0.0036 E14.5 retina ACTGTGGAGG (5) 1.8 0.0018 E14.5 retina AGGCTGAGGC (3) 1.8 0.0018 E14.5 retina GAGAGGCTCA (4) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina TGGAGCAGTG 12.7 0.0127 E16.5 retina CACCACCACT (20) 1.8 0.0018 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CACCACCACT (20) 5.5 0.0055 E18.5 retina ACTGTGGAGG (5) 1.8 0.0018 E18.5 retina TGGAGCAGTG 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TCCATTGCTG (5) 5.9 0.0059 P0.5 retina CACCACCACT (20) 3.9 0.0039 P0.5 retina GAGAGGCTCA (4) 3.9 0.0039 P0.5 retina ACTGTGGAGG (5) 2 0.002 P0.5 retina AGGGCCTGTC (2) 2 0.002 P0.5 retina CTGGCGATGC (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina TGGAGCAGTG 10.6 0.0106 P2.5 retina CACCACCACT (20) 5.3 0.0053 P2.5 retina CTGGCGATGC (2) 1.8 0.0018 P2.5 retina TCCATTGCTG (5) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TCCATTGCTG (5) 5.9 0.0059 P4.5 retina CACCACCACT (20) 4 0.004 P4.5 retina TGGAGCAGTG 4 0.004 P4.5 retina AGGGCCTGTC (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CACCACCACT (20) 5 0.005 P6.5 retina TCCATTGCTG (5) 3.3 0.0033 P6.5 retina TGGAGCAGTG 3.3 0.0033 P6.5 retina AGGGCCTGTC (2) 1.7 0.0017 P6.5 retina CTGGCGATGC (2) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina TCCATTGCTG (5) 9.3 0.0093 P10.5 crx- retina CTGGCGATGC (2) 5.6 0.0056 P10.5 crx- retina GAGAGGCTCA (4) 5.6 0.0056 P10.5 crx- retina TGGAGCAGTG 3.7 0.0037 P10.5 crx- retina CACCACCACT (20) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CACCACCACT (20) 3.8 0.0038 P10.5 crx+ retina TGGAGCAGTG 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal TGGAGCAGTG 11.1 0.0111 Adult retinal CACCACCACT (20) 9.3 0.0093 Adult retinal TCCATTGCTG (5) 9.3 0.0093 Adult retinal AGGGCCTGTC (2) 3.7 0.0037 Adult retinal GAGAGGCTCA (4) 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CACCACCACT (20) 3.8 0.0038 ONL GAGAGGCTCA (4) 3.8 0.0038 ONL TCCATTGCTG (5) 3.8 0.0038 ONL TGGAGCAGTG 3.8 0.0038 ONL AGGCTGAGGC (3) 1.9 0.0019 ONL CTGGCGATGC (2) 1.9 0.0019