Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.20818	2600002E23Rik	RIKEN cDNA 2600002E23 gene	4		67898
Gene Ontology	calcium ion binding
Human Homolog	PEF[PEF protein with a long N-terminal hydrophobic domain (peflin)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 85 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC CTGCTGGTGG (15) 13.1 0.0131 P8 Cb GC TTTTCAAAAA (9) 3.3 0.0033 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TTTTCAAAAA (9) 13.9 0.0139 Cb medulloblastoma CTGCTGGTGG (15) 11.6 0.0116 Cb medulloblastoma TTTAAAAAAA (34) 6.9 0.0069 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TTTTCAAAAA (9) 37.7 0.0377 P8 GC+1d culture CTGCTGGTGG (15) 16 0.016 P8 GC+1d culture ACCACCAAAA (2) 1.1 0.0011 P8 GC+1d culture AGCCTCATCA (3) 1.1 0.0011 P8 GC+1d culture ATTTCAAAAA (10) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TTTTCAAAAA (9) 19.9 0.0199 P8 GC+SHH+1d culture CTGCTGGTGG (15) 10.5 0.0105 P8 GC+SHH+1d culture ACCACCAAAA (2) 7 0.007 P8 GC+SHH+1d culture TTTAAAAAAA (34) 5.9 0.0059 P8 GC+SHH+1d culture TTTTCCACCA (3) 2.3 0.0023 P8 GC+SHH+1d culture AGCCTCATCA (3) 1.2 0.0012 P8 GC+SHH+1d culture ATTTCAAAAA (10) 1.2 0.0012 3T3 fibroblasts CTGCTGGTGG (15) 59.6 0.0596 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TTTTCAAAAA (9) 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex CTGCTGGTGG (15) 9.9 0.0099 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex CTGCTGGTGG (15) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TTTAAAAAAA (34) 10.9 0.0109 Hypothalamus CTGCTGGTGG (15) 7.2 0.0072 Hypothalamus TTTTCAAAAA (9) 7.2 0.0072 Hypothalamus TTTTCCAAAA (4) 3.6 0.0036 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TTTTCAAAAA (9) 3.8 0.0038 E12.5 retina TTTAAAAAAA (34) 1.9 0.0019 E12.5 retina TTTTCCAAAA (4) 1.9 0.0019 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TTTAAAAAAA (34) 9.1 0.0091 E14.5 retina TTTTCAAAAA (9) 5.5 0.0055 E14.5 retina ACCACCAAAA (2) 3.6 0.0036 E14.5 retina CTGCTGGTGG (15) 1.8 0.0018 E14.5 retina TTTTCCACCA (3) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina ACCACCAAAA (2) 1.8 0.0018 E16.5 retina AGCCTCATCA (3) 1.8 0.0018 E16.5 retina TTTAAAAAAA (34) 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TTTAAAAAAA (34) 10.9 0.0109 E18.5 retina CTGCTGGTGG (15) 3.6 0.0036 E18.5 retina TTTTCCAAAA (4) 3.6 0.0036 E18.5 retina TTTTCAAAAA (9) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina CTGCTGGTGG (15) 9.8 0.0098 P0.5 retina ACCACCAAAA (2) 3.9 0.0039 P0.5 retina TTTAAAAAAA (34) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina CTGCTGGTGG (15) 5.3 0.0053 P2.5 retina ATTTCAAAAA (10) 1.8 0.0018 P2.5 retina TTTAAAAAAA (34) 1.8 0.0018 P2.5 retina TTTTCAAAAA (9) 1.8 0.0018 P2.5 retina TTTTCCAAAA (4) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TTTAAAAAAA (34) 5.9 0.0059 P4.5 retina ACCACCAAAA (2) 2 0.002 P4.5 retina CTGCTGGTGG (15) 2 0.002 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina CTGCTGGTGG (15) 6.7 0.0067 P6.5 retina TTTAAAAAAA (34) 6.7 0.0067 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CTGCTGGTGG (15) 11.1 0.0111 P10.5 crx- retina TTTTCAAAAA (9) 3.7 0.0037 P10.5 crx- retina ATTTCAAAAA (10) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina CTGCTGGTGG (15) 3.8 0.0038 P10.5 crx+ retina ACCACCAAAA (2) 1.9 0.0019 P10.5 crx+ retina ATTTCAAAAA (10) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal CTGCTGGTGG (15) 20.4 0.0204 Adult retinal ACCACCAAAA (2) 1.9 0.0019 Adult retinal TTTTCAAAAA (9) 1.9 0.0019 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL CTGCTGGTGG (15) 7.7 0.0077 ONL TTTAAAAAAA (34) 7.7 0.0077 ONL TTTTCAAAAA (9) 1.9 0.0019