Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.2082
Apod
apolipoprotein D
16
16 21.2 cM
11815
Gene Ontology
extracellular space
|
lipid binding
|
transport
|
transporter activity
Human Homolog
APOD[apolipoprotein D]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 71 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTGGCGCACG (
61
)
13.1
0.0131
P8 Cb GC
GAAAGTTGGC
(
4
)
6.5
0.0065
P8 Cb GC
TGGGATTTTG (
5
)
3.3
0.0033
P8 Cb GC
AAAAGAAAAA (
21
)
1.6
0.0016
P8 Cb GC
AACCAAGTAA
(
2
)
1.6
0.0016
Cb medulloblastoma
GAAAGTTGGC
(
4
)
43.9
0.0439
Cb medulloblastoma
AAAAGAAAAA (
21
)
11.6
0.0116
Cb medulloblastoma
GTGGCGCACG (
61
)
6.9
0.0069
Cb medulloblastoma
AACCAAGTAA
(
2
)
2.3
0.0023
P8 GC+1d culture
GAAAGTTGGC
(
4
)
9.1
0.0091
P8 GC+1d culture
GTGGCGCACG (
61
)
6.8
0.0068
P8 GC+1d culture
AAAAGAAAAA (
21
)
1.1
0.0011
P8 GC+1d culture
GAAGAGCCAG
(
7
)
1.1
0.0011
P8 GC+1d culture
GCAGGCACTA
(
2
)
1.1
0.0011
P8 GC+1d culture
TGGGATTTTG (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
GAAAGTTGGC
(
4
)
14.1
0.0141
P8 GC+SHH+1d culture
AAAAGAAAAA (
21
)
3.5
0.0035
P8 GC+SHH+1d culture
GTGGCGCACG (
61
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAGGCACTA
(
2
)
1.2
0.0012
3T3 fibroblasts
GTGGCGCACG (
61
)
63.1
0.0631
3T3 fibroblasts
GAAAGTTGGC
(
4
)
3.5
0.0035
3T3 fibroblasts
TGGATTTTGT (
3
)
3.5
0.0035
E15 cortex
GTGGCGCACG (
61
)
113.8
0.1138
E15 cortex
GAAAGTTGGC
(
4
)
4.9
0.0049
E15 cortex
GCAGGCACTA
(
2
)
4.9
0.0049
P1 cortex
GTGGCGCACG (
61
)
18.2
0.0182
P1 cortex
GAAAGTTGGC
(
4
)
4.5
0.0045
Hypothalamus
GAAAGTTGGC
(
4
)
29
0.029
Hypothalamus
GAAGAGCCAG
(
7
)
3.6
0.0036
Hypothalamus
GTGGCGCACG (
61
)
3.6
0.0036
Hypothalamus
GCAGGCACTA
(
2
)
1.8
0.0018
Hypothalamus
TGGATTTTGT (
3
)
1.8
0.0018
E12.5 retina
GTGGCGCACG (
61
)
11.3
0.0113
E14.5 retina
GTGGCGCACG (
61
)
29.2
0.0292
E14.5 retina
GTCTACAAAG (
4
)
5.5
0.0055
E14.5 retina
TGGATTTTGT (
3
)
1.8
0.0018
E16.5 retina
GTGGCGCACG (
61
)
25.4
0.0254
E16.5 retina
AACCAAGTAA
(
2
)
5.4
0.0054
E16.5 retina
GTCTACAAAG (
4
)
1.8
0.0018
E18.5 retina
GTGGCGCACG (
61
)
10.9
0.0109
E18.5 retina
AAAAGAAAAA (
21
)
5.5
0.0055
P0.5 retina
GTGGCGCACG (
61
)
25.5
0.0255
P0.5 retina
GTCTACAAAG (
4
)
5.9
0.0059
P0.5 retina
GAAAGTTGGC
(
4
)
3.9
0.0039
P0.5 retina
TGGGATTTTG (
5
)
2
0.002
P2.5 retina
GTGGCGCACG (
61
)
17.6
0.0176
P2.5 retina
GTCTACAAAG (
4
)
7
0.007
P2.5 retina
AAAAGAAAAA (
21
)
3.5
0.0035
P4.5 retina
GTGGCGCACG (
61
)
17.8
0.0178
P4.5 retina
AAAAGAAAAA (
21
)
9.9
0.0099
P4.5 retina
TGGATTTTGT (
3
)
5.9
0.0059
P4.5 retina
TGGGATTTTG (
5
)
4
0.004
P4.5 retina
GAAAGTTGGC
(
4
)
2
0.002
P4.5 retina
GTCTACAAAG (
4
)
2
0.002
P6.5 retina
GTGGCGCACG (
61
)
38.3
0.0383
P6.5 retina
AACCAAGTAA
(
2
)
3.3
0.0033
P6.5 retina
GAAAGTTGGC
(
4
)
3.3
0.0033
P6.5 retina
TGGGATTTTG (
5
)
3.3
0.0033
P10.5 crx- retina
GTGGCGCACG (
61
)
13
0.013
P10.5 crx- retina
AACCAAGTAA
(
2
)
3.7
0.0037
P10.5 crx- retina
AAAAGAAAAA (
21
)
1.9
0.0019
P10.5 crx- retina
GTCTACAAAG (
4
)
1.9
0.0019
P10.5 crx+ retina
GTGGCGCACG (
61
)
32.7
0.0327
P10.5 crx+ retina
AAAAGAAAAA (
21
)
1.9
0.0019
P10.5 crx+ retina
GAAGAGCCAG
(
7
)
1.9
0.0019
Adult retinal
GTGGCGCACG (
61
)
22.2
0.0222
Adult retinal
GTCTACAAAG (
4
)
5.6
0.0056
Adult retinal
AAAAGAAAAA (
21
)
1.9
0.0019
ONL
GTGGCGCACG (
61
)
23
0.023
ONL
AAAAGAAAAA (
21
)
5.7
0.0057
ONL
GTCTACAAAG (
4
)
1.9
0.0019
